Mercurial > repos > geert-vandeweyer > files_to_ftp
comparison DownloadFiles.xml @ 0:272bdc723756 draft
Initial Commit
| author | geert-vandeweyer |
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| date | Thu, 10 Jan 2013 04:08:33 -0500 |
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| -1:000000000000 | 0:272bdc723756 |
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| 1 <tool id="DownloadFiles" name="Files_2_FTP" version="0.0.1"> | |
| 2 <description>Copy Files to your FTP account for easy download</description> | |
| 3 <command interpreter="python">DownloadFiles.py "$outfile" "$__user_email__" "$foldername" "$__app__.config.ftp_upload_dir" | |
| 4 #for $q in $datafiles | |
| 5 "${q.input2}" "${q.input2.display_name}" "${q.input2.ext}" | |
| 6 #end for | |
| 7 | |
| 8 </command> | |
| 9 <inputs> | |
| 10 <param name="foldername" type="text" label="Folder To Create on FTP server" help="This folder will hold the transferred data"/> | |
| 11 <repeat name="datafiles" title="Data Files to download"> | |
| 12 <!-- <param format="bam,tabular,bed,ab1,afg,axt,bedgraph,bedstrict,bed6,bed12,len,bigbed,bigwig,coverage,csv,customtrack,bowtie_color_index,bowtie_base_index,fastq,fastqsanger,fastqsolexa,fastqcssanger,fastqillumina,eland,elandmulti,genetrack,gff,gff3,gif,gmaj.zip,gtf,html,interval,picard_interval_list,gatk_interval,gatk_dbsnp,jpg,laj,lav,maf,mafcustomtrack,pdf,pileup,png,qual,qualsolexa,qualillumina,qualsolid,qual454,Roadmaps,sam,scf,Sequences,sff,svg,taxonomy,txt,memexml,blastxml,vcf,wsf,velvet,wig" name="input2" type="data" label="Select" /> --> | |
| 13 <param name="input2" type="data" label="Select" /> | |
| 14 </repeat> | |
| 15 | |
| 16 </inputs> | |
| 17 <outputs> | |
| 18 <data format="html" name="outfile" /> | |
| 19 </outputs> | |
| 20 | |
| 21 <help> | |
| 22 **What it does** | |
| 23 | |
| 24 Copies selected datasets to your FTP account on this galaxy instance. You can then use an FTP client to download the files. | |
| 25 The files will be placed in a subfolder with the specified name. If no name is specified, a folder with the current data will be used. | |
| 26 **Input** | |
| 27 | |
| 28 Any dataset from the history. | |
| 29 | |
| 30 **Output** | |
| 31 | |
| 32 An html file, with an overview of the copied files. | |
| 33 | |
| 34 </help> | |
| 35 | |
| 36 </tool> |