diff DownloadFiles.py @ 1:47070a3859df draft

Uploaded
author geert-vandeweyer
date Thu, 10 Jan 2013 04:09:38 -0500
parents
children 837fafa672d2
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/DownloadFiles.py	Thu Jan 10 04:09:38 2013 -0500
@@ -0,0 +1,62 @@
+#!/usr/bin/env python
+#by Geert Vandeweyer.
+
+#from galaxy import eggs
+import sys, os
+import os.path
+import datetime
+
+def stop_err(msg):
+    sys.stderr.write(msg)
+    sys.exit()
+    
+def __main__():
+    htmloutfile = sys.argv[1]
+    useremail = sys.argv[2]
+    folder = sys.argv[3] 
+    ftpdirconfig = sys.argv[4]
+    try:
+        fout = open(sys.argv[1],'w')
+    except:
+        stop_err("Output file cannot be opened for writing.")
+    
+    if len(sys.argv) < 5:
+   	stop_err("No datafiles specified!"); 
+
+    # write header to outfile	
+    fout.write("<html><body><h2>Files copied to your FTP account.</h2>")
+    filecounter = 5 
+    fout.write("<p><ol> ")
+    now = datetime.datetime.now()
+    date=str(now)[:10]
+    fout.write("<li>%s</li>" %(len(sys.argv)))
+    # compose ftp storage location
+    ftpdir="%s/%s/" %(ftpdirconfig,useremail)
+    if len(folder) == 0:
+	    subdir = date
+	    storedir="%s/%s/%s/" %(ftpdirconfig,useremail,date)
+    else:
+	    storedir="%s/%s/%s/" %(ftpdirconfig,useremail,folder)
+	    subdir = folder
+    if not os.path.exists(ftpdir):
+    	os.makedirs(ftpdir)
+    if not os.path.exists(storedir):
+    	os.makedirs(storedir)
+	
+    while filecounter < len(sys.argv):
+	inp = sys.argv[filecounter]
+	name = sys.argv[(filecounter+1)]
+	ext = sys.argv[(filecounter+2)]
+	# copy files to tmp dir & filenames
+	os.system("cp '%s' '%s/%s.%s'" %(inp, storedir,name,ext))
+	fout.write("<li>%s.%s</li>" %(name,ext))
+	filecounter +=3
+	
+    fout.write("</ol></p>")
+    fout.write("<p>Info: Files written to the '%s' subdirectory in your FTP account</p></body></html>" %(subdir))
+    # close file
+    fout.close 
+
+        
+if __name__ == "__main__": __main__()
+