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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="bamtools" version="2.3.0">
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4 <install version="1.0">
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5 <actions>
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6 <action type="download_by_url">https://github.com/pezmaster31/bamtools/archive/v2.3.0.tar.gz</action>
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7 <action type="shell_command">./configure && make</action>
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8 <action type="move_file">
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9 <source>bin/</source>
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10 <destination>$INSTALL_DIR/bin</destination>
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11 </action>
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12 <action type="set_environment">
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13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
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14 </action>
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15 </actions>
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16 </install>
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17 <readme>
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18 BamTools provides both a programmer's API and an end-user's toolkit for handling BAM files. Both the BamTools API and toolkit are released under the MIT License. Copyright (c) 2009-2010 Derek Barnett, Erik Garrison, Gabor Marth, Michael Stromberg
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19 </readme>
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20 </package>
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21 </tool_dependency>
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