comparison tool_dependencies.xml @ 0:c78801ae8bb3 draft

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author geert-vandeweyer
date Tue, 18 Feb 2014 03:49:39 -0500
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1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="bamtools" version="2.3.0">
4 <install version="1.0">
5 <actions>
6 <action type="download_by_url">https://github.com/pezmaster31/bamtools/archive/v2.3.0.tar.gz</action>
7 <action type="shell_command">./configure &amp;&amp; make</action>
8 <action type="move_file">
9 <source>bin/</source>
10 <destination>$INSTALL_DIR/bin</destination>
11 </action>
12 <action type="set_environment">
13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
14 </action>
15 </actions>
16 </install>
17 <readme>
18 BamTools provides both a programmer's API and an end-user's toolkit for handling BAM files. Both the BamTools API and toolkit are released under the MIT License. Copyright (c) 2009-2010 Derek Barnett, Erik Garrison, Gabor Marth, Michael Stromberg
19 </readme>
20 </package>
21 </tool_dependency>