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Corrected installation commands
author geert-vandeweyer
date Tue, 18 Feb 2014 03:56:01 -0500
parents c78801ae8bb3
children
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<?xml version="1.0"?>
<tool_dependency>
    <package name="bamtools" version="2.3.0">
        <install version="1.0">
            <actions>
                <action type="download_by_url" target_filename="bamtools-2.3.0.tar.gz">https://github.com/pezmaster31/bamtools/archive/v2.3.0.tar.gz</action>
		<action type="make_directory">build</action>
                <action type="shell_command">cd build &amp;&amp; cmake .. &amp;&amp; make</action>
		<action type="move_file">
			<source>bin/</source>
			<destination>$INSTALL_DIR/bin</destination>
		</action>
                <action type="set_environment">
			<environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
                </action>
            </actions>
        </install>
        <readme>
        	BamTools provides both a programmer's API and an end-user's toolkit for handling BAM files. Both the BamTools API and toolkit are released under the MIT License. Copyright (c) 2009-2010 Derek Barnett, Erik Garrison, Gabor Marth, Michael Stromberg
	</readme>
    </package>
</tool_dependency>