Mercurial > repos > geert-vandeweyer > package_bamtools_2_3_0

changeset 0:c78801ae8bb3 draft

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Uploaded
author geert-vandeweyer
date Tue, 18 Feb 2014 03:49:39 -0500
parents
children def41213572b
files tool_dependencies.xml
diffstat 1 files changed, 21 insertions(+), 0 deletions(-) [+]
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line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Tue Feb 18 03:49:39 2014 -0500
@@ -0,0 +1,21 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="bamtools" version="2.3.0">
+        <install version="1.0">
+            <actions>
+                <action type="download_by_url">https://github.com/pezmaster31/bamtools/archive/v2.3.0.tar.gz</action>
+                <action type="shell_command">./configure &amp;&amp; make</action>
+		<action type="move_file">
+			<source>bin/</source>
+			<destination>$INSTALL_DIR/bin</destination>
+		</action>
+                <action type="set_environment">
+			<environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>
+        	BamTools provides both a programmer's API and an end-user's toolkit for handling BAM files. Both the BamTools API and toolkit are released under the MIT License. Copyright (c) 2009-2010 Derek Barnett, Erik Garrison, Gabor Marth, Michael Stromberg
+	</readme>
+    </package>
+</tool_dependency>