annotate varscan/tool_dependencies.xml @ 4:572397bbe057 draft default tip

Added Xmx10G setting to both varscan_somatic wrappers
author geert-vandeweyer
date Wed, 26 Mar 2014 05:24:22 -0400
parents 848f3dc54593
children
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="VarScan" version="2.3.5">
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4 <install version="1.0">
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5 <actions>
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6 <action type="download_by_url">http://downloads.sourceforge.net/project/varscan/VarScan.v2.3.5.jar</action>
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7 <action type="move_file">
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8 <source>VarScan.v2.3.5.jar</source>
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9 <destination>$INSTALL_DIR/jars</destination>
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10 </action>
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11 <action type="set_environment">
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12 <environment_variable name="JAVA_JAR_PATH" action="set_to">$INSTALL_DIR/jars</environment_variable>
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13 </action>
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14 </actions>
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15 </install>
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16 <readme>
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17 </readme>
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18 </package>
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19 </tool_dependency>