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comparison varscan/output.validation @ 4:572397bbe057 draft default tip

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Added Xmx10G setting to both varscan_somatic wrappers
author geert-vandeweyer
date Wed, 26 Mar 2014 05:24:22 -0400
parents 848f3dc54593
children
comparison
equal deleted inserted replaced
3:b2ad469e0ff9 4:572397bbe057
1 ##fileformat=VCFv4.1
2 ##source=VarScan2
3 ##INFO=<ID=DP,Number=1,Type=Integer,Description="Total depth of quality bases">
4 ##INFO=<ID=SOMATIC,Number=0,Type=Flag,Description="Indicates if record is a somatic mutation">
5 ##INFO=<ID=SS,Number=1,Type=String,Description="Somatic status of variant (0=Reference,1=Germline,2=Somatic,3=LOH, or 5=Unknown)">
6 ##INFO=<ID=SSC,Number=1,Type=String,Description="Somatic score in Phred scale (0-255) derived from somatic p-value">
7 ##INFO=<ID=GPV,Number=1,Type=Float,Description="Fisher's Exact Test P-value of tumor+normal versus no variant for Germline calls">
8 ##INFO=<ID=SPV,Number=1,Type=Float,Description="Fisher's Exact Test P-value of tumor versus normal for Somatic/LOH calls">
9 ##FILTER=<ID=str10,Description="Less than 10% or more than 90% of variant supporting reads on one strand">
10 ##FILTER=<ID=indelError,Description="Likely artifact due to indel reads at this position">
11 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
12 ##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality">
13 ##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
14 ##FORMAT=<ID=RD,Number=1,Type=Integer,Description="Depth of reference-supporting bases (reads1)">
15 ##FORMAT=<ID=AD,Number=1,Type=Integer,Description="Depth of variant-supporting bases (reads2)">
16 ##FORMAT=<ID=FREQ,Number=1,Type=String,Description="Variant allele frequency">
17 ##FORMAT=<ID=DP4,Number=1,Type=String,Description="Strand read counts: ref/fwd, ref/rev, var/fwd, var/rev">
18 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT NORMAL TUMOR
19 chr1 11190596 . T . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:13,7,0,0 0/0:.:8:8:0:0%:6,2,0,0
20 chr1 11190597 . T . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:13,7,0,0 0/0:.:8:8:0:0%:6,2,0,0
21 chr1 11190598 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:13,7,0,0 0/0:.:8:7:0:0%:5,2,0,0
22 chr1 11190599 . T . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:13,7,0,0 0/0:.:8:7:0:0%:6,1,0,0
23 chr1 11190600 . T . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:13,7,0,0 0/0:.:8:7:0:0%:5,2,0,0
24 chr1 11190601 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:13,7,0,0 0/0:.:8:8:0:0%:6,2,0,0
25 chr1 11190602 . T . PASS DP=32;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:21:19:0:0%:13,6,0,0 0/0:.:11:8:0:0%:6,2,0,0
26 chr1 11190603 . G . PASS DP=32;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:21:20:0:0%:14,6,0,0 0/0:.:11:11:0:0%:9,2,0,0
27 chr1 11190604 . C . PASS DP=34;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:21:20:0:0%:13,7,0,0 0/0:.:13:12:0:0%:8,4,0,0
28 chr1 11190605 . A . PASS DP=34;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:21:20:0:0%:13,7,0,0 0/0:.:13:10:0:0%:8,2,0,0
29 chr1 11190606 . G . PASS DP=36;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:22:20:0:0%:13,7,0,0 0/0:.:14:12:0:0%:8,4,0,0
30 chr1 11190607 . C . PASS DP=36;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:22:22:0:0%:13,9,0,0 0/0:.:14:14:0:0%:9,5,0,0
31 chr1 11190608 . G . PASS DP=36;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:22:22:0:0%:13,9,0,0 0/0:.:14:12:0:0%:7,5,0,0
32 chr1 11190609 . G . PASS DP=37;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:22:22:0:0%:13,9,0,0 0/0:.:15:14:0:0%:9,5,0,0
33 chr1 11190610 . C . PASS DP=37;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:22:22:0:0%:13,9,0,0 0/0:.:15:15:0:0%:9,6,0,0
34 chr1 11190611 . G . PASS DP=37;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:22:21:0:0%:13,8,0,0 0/0:.:15:15:0:0%:9,6,0,0
35 chr1 11190612 . A . PASS DP=38;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:23:21:0:0%:13,8,0,0 0/0:.:15:13:0:0%:8,5,0,0
36 chr1 11190613 . T . PASS DP=39;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:24:24:0:0%:13,11,0,0 0/0:.:15:14:0:0%:8,6,0,0
37 chr1 11190614 . G . PASS DP=40;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:25:0:0%:13,12,0,0 0/0:.:15:15:0:0%:9,6,0,0
38 chr1 11190615 . G . PASS DP=40;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:25:0:0%:13,12,0,0 0/0:.:15:15:0:0%:9,6,0,0
39 chr1 11190616 . G . PASS DP=40;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:25:0:0%:13,12,0,0 0/0:.:15:15:0:0%:9,6,0,0
40 chr1 11190617 . G . PASS DP=40;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:24:0:0%:13,11,0,0 0/0:.:15:15:0:0%:9,6,0,0
41 chr1 11190618 . T . PASS DP=40;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:24:0:0%:12,12,0,0 0/0:.:15:13:0:0%:8,5,0,0
42 chr1 11190619 . G . PASS DP=40;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:25:0:0%:13,12,0,0 0/0:.:15:15:0:0%:9,6,0,0
43 chr1 11190620 . G . PASS DP=40;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:24:0:0%:13,11,0,0 0/0:.:15:15:0:0%:9,6,0,0
44 chr1 11190621 . G . PASS DP=40;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:25:0:0%:13,12,0,0 0/0:.:15:14:0:0%:8,6,0,0
45 chr1 11190622 . G . PASS DP=41;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:24:0:0%:13,11,0,0 0/0:.:16:14:0:0%:8,6,0,0
46 chr1 11190623 . C . PASS DP=42;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:24:0:0%:12,12,0,0 0/0:.:17:17:0:0%:9,8,0,0
47 chr1 11190624 . T . PASS DP=42;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:25:0:0%:13,12,0,0 0/0:.:17:17:0:0%:9,8,0,0
48 chr1 11190625 . G . PASS DP=42;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:25:0:0%:13,12,0,0 0/0:.:17:17:0:0%:9,8,0,0
49 chr1 11190626 . T . PASS DP=42;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:25:0:0%:13,12,0,0 0/0:.:17:17:0:0%:9,8,0,0
50 chr1 11190627 . T . PASS DP=42;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:23:0:0%:11,12,0,0 0/0:.:17:16:0:0%:8,8,0,0
51 chr1 11190628 . C . PASS DP=42;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:25:0:0%:13,12,0,0 0/0:.:17:16:0:0%:9,7,0,0
52 chr1 11190629 . T . PASS DP=42;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:25:0:0%:13,12,0,0 0/0:.:17:16:0:0%:9,7,0,0
53 chr1 11190630 . C . PASS DP=41;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:25:0:0%:13,12,0,0 0/0:.:16:16:0:0%:9,7,0,0
54 chr1 11190631 . G . PASS DP=40;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:25:0:0%:13,12,0,0 0/0:.:15:15:0:0%:8,7,0,0
55 chr1 11190632 . G . PASS DP=40;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:25:0:0%:13,12,0,0 0/0:.:15:15:0:0%:8,7,0,0
56 chr1 11190633 . T . PASS DP=42;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:27:24:0:0%:11,13,0,0 0/0:.:15:15:0:0%:8,7,0,0
57 chr1 11190634 . G . PASS DP=42;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:27:26:0:0%:14,12,0,0 0/0:.:15:14:0:0%:8,6,0,0
58 chr1 11190635 . C . PASS DP=42;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:27:27:0:0%:14,13,0,0 0/0:.:15:14:0:0%:7,7,0,0
59 chr1 11190636 . T . PASS DP=42;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:27:26:0:0%:13,13,0,0 0/0:.:15:14:0:0%:7,7,0,0
60 chr1 11190637 . C . PASS DP=41;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:27:26:0:0%:13,13,0,0 0/0:.:14:14:0:0%:7,7,0,0
61 chr1 11190638 . T . PASS DP=41;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:27:27:0:0%:14,13,0,0 0/0:.:14:14:0:0%:7,7,0,0
62 chr1 11190639 . C . PASS DP=41;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:27:27:0:0%:14,13,0,0 0/0:.:14:14:0:0%:7,7,0,0
63 chr1 11190640 . G . PASS DP=41;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:27:26:0:0%:13,13,0,0 0/0:.:14:14:0:0%:7,7,0,0
64 chr1 11190641 . G . PASS DP=41;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:27:27:0:0%:14,13,0,0 0/0:.:14:14:0:0%:7,7,0,0
65 chr1 11190642 . C . PASS DP=46;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:27:27:0:0%:15,12,0,0 0/0:.:19:16:0:0%:9,7,0,0
66 chr1 11190643 . C . PASS DP=50;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:29:29:0:0%:15,14,0,0 0/0:.:21:19:0:0%:10,9,0,0
67 chr1 11190644 . T . PASS DP=51;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:30:30:0:0%:15,15,0,0 0/0:.:21:21:0:0%:12,9,0,0
68 chr1 11190645 . C . PASS DP=52;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:30:29:0:0%:15,14,0,0 0/0:.:22:21:0:0%:12,9,0,0
69 chr1 11190646 . G A . PASS DP=53;SOMATIC;SS=2;SSC=13;GPV=1E0;SPV=4.429E-2 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:31:31:0:0%:15,16,0,0 0/1:.:22:15:3:16.67%:9,6,1,2
70 chr1 11190647 . C . PASS DP=53;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:31:29:0:0%:13,16,0,0 0/0:.:22:20:0:0%:10,10,0,0
71 chr1 11190648 . T . PASS DP=53;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:31:31:0:0%:15,16,0,0 0/0:.:22:20:0:0%:10,10,0,0
72 chr1 11190649 . C . PASS DP=53;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:31:31:0:0%:15,16,0,0 0/0:.:22:22:0:0%:12,10,0,0
73 chr1 11190650 . T . PASS DP=53;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:31:31:0:0%:15,16,0,0 0/0:.:22:22:0:0%:12,10,0,0
74 chr1 11190651 . C . PASS DP=53;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:30:30:0:0%:14,16,0,0 0/0:.:23:21:0:0%:11,10,0,0
75 chr1 11190652 . A . PASS DP=40;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:21:19:0:0%:10,9,0,0 0/0:.:19:17:0:0%:9,8,0,0
76 chr1 11190653 . C . PASS DP=37;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:18:17:0:0%:7,10,0,0 0/0:.:19:19:0:0%:9,10,0,0
77 chr1 11190654 . T . PASS DP=37;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:18:18:0:0%:8,10,0,0 0/0:.:19:17:0:0%:9,8,0,0
78 chr1 11190655 . G . PASS DP=30;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:16:15:0:0%:7,8,0,0 0/0:.:14:14:0:0%:6,8,0,0
79 chr1 11190656 . T . PASS DP=30;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:16:15:0:0%:6,9,0,0 0/0:.:14:14:0:0%:6,8,0,0
80 chr1 11190657 . T . PASS DP=30;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:16:15:0:0%:6,9,0,0 0/0:.:14:13:0:0%:5,8,0,0
81 chr1 11190658 . G . PASS DP=30;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:16:15:0:0%:7,8,0,0 0/0:.:14:14:0:0%:6,8,0,0
82 chr1 11190659 . C . PASS DP=30;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:16:14:0:0%:5,9,0,0 0/0:.:14:13:0:0%:6,7,0,0
83 chr1 11190660 . T . PASS DP=31;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:17:17:0:0%:7,10,0,0 0/0:.:14:14:0:0%:6,8,0,0
84 chr1 11190661 . G . PASS DP=31;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:17:16:0:0%:7,9,0,0 0/0:.:14:14:0:0%:6,8,0,0
85 chr1 11190662 . C . PASS DP=31;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:17:16:0:0%:6,10,0,0 0/0:.:14:14:0:0%:6,8,0,0
86 chr1 11190663 . C . PASS DP=31;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:17:17:0:0%:7,10,0,0 0/0:.:14:14:0:0%:6,8,0,0
87 chr1 11190664 . C . PASS DP=31;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:17:15:0:0%:6,9,0,0 0/0:.:14:14:0:0%:6,8,0,0
88 chr1 11190665 . T . PASS DP=31;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:17:16:0:0%:7,9,0,0 0/0:.:14:8:0:0%:4,4,0,0
89 chr1 11190666 . C . PASS DP=31;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:17:16:0:0%:7,9,0,0 0/0:.:14:12:0:0%:6,6,0,0
90 chr1 11190667 . G . PASS DP=32;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:17:16:0:0%:7,9,0,0 1/1:.:15:15:0:0%:6,9,0,0
91 chr1 11190668 . G . PASS DP=32;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:17:16:0:0%:7,9,0,0 1/1:.:15:15:0:0%:6,9,0,0
92 chr1 11190669 . T A . str10 DP=32;SS=0;SSC=0;GPV=1E0;SPV=4.8148E-1 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:17:14:0:0%:5,9,0,0 1/1:.:15:12:1:7.69%:4,8,1,0
93 chr1 11190670 . G . PASS DP=32;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:17:14:0:0%:6,8,0,0 1/1:.:15:10:0:0%:5,5,0,0
94 chr1 11190671 . C . PASS DP=32;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:17:15:0:0%:5,10,0,0 1/1:.:15:14:0:0%:6,8,0,0
95 chr1 11190672 . T . PASS DP=32;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:17:17:0:0%:7,10,0,0 1/1:.:15:15:0:0%:6,9,0,0
96 chr1 11190673 . G . PASS DP=32;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:17:17:0:0%:7,10,0,0 1/1:.:15:13:0:0%:5,8,0,0
97 chr1 11190674 . G . PASS DP=32;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:17:13:0:0%:7,6,0,0 1/1:.:15:15:0:0%:6,9,0,0
98 chr1 11190675 . C . PASS DP=32;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:17:15:0:0%:5,10,0,0 1/1:.:15:14:0:0%:5,9,0,0
99 chr1 11190676 . A . PASS DP=32;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:17:15:0:0%:6,9,0,0 1/1:.:15:14:0:0%:5,9,0,0
100 chr1 11190677 . G . PASS DP=32;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:17:17:0:0%:7,10,0,0 1/1:.:15:15:0:0%:6,9,0,0
101 chr1 11190678 . T . PASS DP=32;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:17:13:0:0%:5,8,0,0 1/1:.:15:15:0:0%:6,9,0,0
102 chr1 11190679 . G . PASS DP=32;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:17:17:0:0%:7,10,0,0 1/1:.:15:14:0:0%:6,8,0,0
103 chr1 11190680 . G . PASS DP=31;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:16:16:0:0%:7,9,0,0 1/1:.:15:15:0:0%:6,9,0,0
104 chr1 11190681 . T . PASS DP=31;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:16:16:0:0%:7,9,0,0 1/1:.:15:15:0:0%:6,9,0,0
105 chr1 11190682 . G . PASS DP=31;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:16:16:0:0%:7,9,0,0 1/1:.:15:13:0:0%:6,7,0,0
106 chr1 11190683 . G . PASS DP=31;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:16:16:0:0%:7,9,0,0 1/1:.:15:14:0:0%:6,8,0,0
107 chr1 11190684 . T . PASS DP=30;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:16:14:0:0%:5,9,0,0 1/1:.:14:13:0:0%:4,9,0,0
108 chr1 11190685 . G . PASS DP=30;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:16:16:0:0%:7,9,0,0 1/1:.:14:14:0:0%:5,9,0,0
109 chr1 11190686 . G . PASS DP=30;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:16:16:0:0%:7,9,0,0 1/1:.:14:12:0:0%:5,7,0,0
110 chr1 11190687 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:16:15:0:0%:6,9,0,0 1/1:.:12:11:0:0%:3,8,0,0
111 chr1 11190688 . A . PASS DP=27;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:15:15:0:0%:6,9,0,0 1/1:.:12:12:0:0%:4,8,0,0
112 chr1 11190689 . G . PASS DP=27;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:15:15:0:0%:6,9,0,0 1/1:.:12:11:0:0%:3,8,0,0
113 chr1 11190690 . T . PASS DP=27;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:15:14:0:0%:5,9,0,0 1/1:.:12:10:0:0%:4,6,0,0
114 chr1 11190691 . G . PASS DP=26;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:14:14:0:0%:5,9,0,0 1/1:.:12:12:0:0%:4,8,0,0
115 chr1 11190692 . G . PASS DP=26;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:14:13:0:0%:5,8,0,0 1/1:.:12:11:0:0%:4,7,0,0
116 chr1 11190693 . C . PASS DP=25;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:14:13:0:0%:4,9,0,0 1/1:.:11:9:0:0%:3,6,0,0
117 chr1 11190694 . G . PASS DP=25;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:14:13:0:0%:4,9,0,0 1/1:.:11:9:0:0%:2,7,0,0
118 chr1 11190695 . G . PASS DP=23;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 1/1:.:12:12:0:0%:3,9,0,0 1/1:.:11:11:0:0%:3,8,0,0
119 chr1 11319318 . A . PASS DP=21;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:12:12:0:0%:7,5,0,0 0/0:.:9:6:0:0%:4,2,0,0
120 chr1 11319319 . T . PASS DP=21;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:12:9:0:0%:4,5,0,0 0/0:.:9:9:0:0%:5,4,0,0
121 chr1 11319320 . G . PASS DP=21;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:12:11:0:0%:7,4,0,0 0/0:.:9:9:0:0%:5,4,0,0
122 chr1 11319321 . G . PASS DP=21;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:12:12:0:0%:8,4,0,0 0/0:.:9:9:0:0%:5,4,0,0
123 chr1 11319322 . T G . PASS DP=22;SS=0;SSC=0;GPV=1E0;SPV=5E-1 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:13:8:1:11.11%:5,3,0,1 0/0:.:9:9:0:0%:5,4,0,0
124 chr1 11319323 . G . PASS DP=23;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:14:14:0:0%:9,5,0,0 0/0:.:9:8:0:0%:4,4,0,0
125 chr1 11319324 . A . PASS DP=23;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:14:14:0:0%:9,5,0,0 0/0:.:9:9:0:0%:5,4,0,0
126 chr1 11319325 . C . PASS DP=23;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:14:13:0:0%:8,5,0,0 0/0:.:9:9:0:0%:5,4,0,0
127 chr1 11319326 . A . PASS DP=23;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:14:14:0:0%:9,5,0,0 0/0:.:9:9:0:0%:5,4,0,0
128 chr1 11319327 . T . PASS DP=23;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:14:12:0:0%:7,5,0,0 0/0:.:9:7:0:0%:5,2,0,0
129 chr1 11319328 . A . PASS DP=24;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:15:15:0:0%:9,6,0,0 0/0:.:9:9:0:0%:5,4,0,0
130 chr1 11319329 . G . PASS DP=24;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:15:14:0:0%:8,6,0,0 0/0:.:9:7:0:0%:5,2,0,0
131 chr1 11319330 . T . PASS DP=24;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:15:15:0:0%:9,6,0,0 0/0:.:9:9:0:0%:5,4,0,0
132 chr1 11319331 . G . PASS DP=24;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:15:14:0:0%:9,5,0,0 0/0:.:9:7:0:0%:5,2,0,0
133 chr1 11319332 . C . PASS DP=24;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:15:15:0:0%:9,6,0,0 0/0:.:9:7:0:0%:5,2,0,0
134 chr1 11319333 . T . PASS DP=24;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:15:13:0:0%:7,6,0,0 0/0:.:9:9:0:0%:5,4,0,0
135 chr1 11319334 . G . PASS DP=24;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:15:15:0:0%:9,6,0,0 0/0:.:9:9:0:0%:5,4,0,0
136 chr1 11319335 . G . PASS DP=24;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:15:15:0:0%:9,6,0,0 0/0:.:9:9:0:0%:5,4,0,0
137 chr1 45292432 . C . PASS DP=40;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:32:31:0:0%:14,17,0,0 0/0:.:8:7:0:0%:2,5,0,0
138 chr1 45292433 . T . PASS DP=40;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:32:32:0:0%:15,17,0,0 0/0:.:8:7:0:0%:2,5,0,0
139 chr1 45292434 . G . PASS DP=40;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:32:30:0:0%:15,15,0,0 0/0:.:8:8:0:0%:3,5,0,0
140 chr1 45292435 . G C . PASS DP=40;SS=0;SSC=0;GPV=1E0;SPV=8.2051E-1 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:32:31:1:3.12%:15,16,0,1 0/0:.:8:7:0:0%:3,4,0,0
141 chr1 45292436 . C . PASS DP=40;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:32:30:0:0%:14,16,0,0 0/0:.:8:7:0:0%:3,4,0,0
142 chr1 45292437 . G . PASS DP=40;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:32:32:0:0%:15,17,0,0 0/0:.:8:8:0:0%:3,5,0,0
143 chr1 45292438 . G . PASS DP=40;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:32:32:0:0%:15,17,0,0 0/0:.:8:8:0:0%:3,5,0,0
144 chr1 45292439 . G . PASS DP=40;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:32:32:0:0%:15,17,0,0 0/0:.:8:8:0:0%:3,5,0,0
145 chr1 45292440 . A . PASS DP=38;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:30:28:0:0%:13,15,0,0 0/0:.:8:8:0:0%:3,5,0,0
146 chr1 45292441 . C . PASS DP=38;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:30:28:0:0%:12,16,0,0 0/0:.:8:8:0:0%:3,5,0,0
147 chr1 45292442 . T A . PASS DP=38;SS=0;SSC=0;GPV=1E0;SPV=8.3333E-1 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:30:29:1:3.33%:13,16,1,0 0/0:.:8:6:0:0%:3,3,0,0
148 chr1 45293099 . C . PASS DP=20;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:12:12:0:0%:6,6,0,0 0/0:.:8:7:0:0%:3,4,0,0
149 chr1 45293100 . A . PASS DP=20;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:12:11:0:0%:5,6,0,0 0/0:.:8:5:0:0%:2,3,0,0
150 chr1 45293101 . G . PASS DP=20;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:12:12:0:0%:6,6,0,0 0/0:.:8:6:0:0%:2,4,0,0
151 chr1 45293102 . C . PASS DP=20;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:12:12:0:0%:6,6,0,0 0/0:.:8:8:0:0%:4,4,0,0
152 chr1 45293103 . C . PASS DP=20;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:12:12:0:0%:6,6,0,0 0/0:.:8:8:0:0%:4,4,0,0
153 chr1 45293104 . A . PASS DP=20;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:12:12:0:0%:6,6,0,0 0/0:.:8:8:0:0%:4,4,0,0
154 chr1 45293105 . G . PASS DP=22;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:14:14:0:0%:6,8,0,0 0/0:.:8:7:0:0%:3,4,0,0
155 chr1 45293106 . G . PASS DP=22;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:14:13:0:0%:6,7,0,0 0/0:.:8:7:0:0%:4,3,0,0
156 chr1 45293107 . T . PASS DP=22;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:14:14:0:0%:6,8,0,0 0/0:.:8:8:0:0%:4,4,0,0
157 chr1 45293108 . G . PASS DP=23;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:15:15:0:0%:6,9,0,0 0/0:.:8:6:0:0%:3,3,0,0
158 chr1 45293109 . C C . str10 DP=23;SS=0;SSC=0;GPV=5.3885E-2;SPV=3.7799E-1 GT:GQ:DP:RD:AD:FREQ:DP4 0/1:.:15:13:2:13.33%:5,8,1,1 0/1:.:8:5:2:28.57%:3,2,0,2
159 chr1 45293110 . G . PASS DP=23;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:15:14:0:0%:6,8,0,0 0/0:.:8:6:0:0%:2,4,0,0
160 chr1 45293111 . G . PASS DP=24;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:16:16:0:0%:6,10,0,0 0/0:.:8:6:0:0%:2,4,0,0
161 chr1 45293112 . G . PASS DP=24;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:16:16:0:0%:6,10,0,0 0/0:.:8:7:0:0%:3,4,0,0
162 chr1 45293113 . G . PASS DP=24;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:16:15:0:0%:6,9,0,0 0/0:.:8:7:0:0%:3,4,0,0
163 chr1 45293114 . T . PASS DP=24;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:16:15:0:0%:5,10,0,0 0/0:.:8:5:0:0%:1,4,0,0
164 chr1 45293115 . G . PASS DP=24;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:16:15:0:0%:6,9,0,0 0/0:.:8:7:0:0%:3,4,0,0
165 chr1 45293116 . C . PASS DP=24;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:16:15:0:0%:5,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
166 chr1 45293117 . C . PASS DP=24;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:16:16:0:0%:6,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
167 chr1 45293118 . T T . PASS DP=24;SS=0;SSC=0;GPV=5.4264E-2;SPV=4.3478E-1 GT:GQ:DP:RD:AD:FREQ:DP4 0/1:.:16:13:2:13.33%:4,9,1,1 0/1:.:8:6:2:25%:3,3,1,1
168 chr1 45293119 . G . PASS DP=24;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:16:14:0:0%:5,9,0,0 0/0:.:8:6:0:0%:3,3,0,0
169 chr1 45293120 . G . PASS DP=24;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:16:14:0:0%:5,9,0,0 0/0:.:8:6:0:0%:3,3,0,0
170 chr1 45293121 . G . PASS DP=23;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:15:13:0:0%:4,9,0,0 0/0:.:8:6:0:0%:3,3,0,0
171 chr1 45293122 . T . PASS DP=23;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:15:14:0:0%:5,9,0,0 0/0:.:8:7:0:0%:3,4,0,0
172 chr1 45293123 . G . PASS DP=23;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:15:15:0:0%:5,10,0,0 0/0:.:8:6:0:0%:4,2,0,0
173 chr1 45293124 . G . PASS DP=23;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:15:15:0:0%:5,10,0,0 0/0:.:8:7:0:0%:4,3,0,0
174 chr1 45293284 . T . PASS DP=31;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:23:21:0:0%:10,11,0,0 0/0:.:8:6:0:0%:3,3,0,0
175 chr1 45293285 . G . PASS DP=31;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:23:21:0:0%:12,9,0,0 0/0:.:8:7:0:0%:5,2,0,0
176 chr1 45293286 . C . PASS DP=32;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:23:19:0:0%:8,11,0,0 0/0:.:9:7:0:0%:3,4,0,0
177 chr1 45293287 . C . PASS DP=32;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:23:22:0:0%:11,11,0,0 0/0:.:9:9:0:0%:5,4,0,0
178 chr1 45293288 . C . PASS DP=34;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:25:0:0%:14,11,0,0 0/0:.:9:9:0:0%:5,4,0,0
179 chr1 45293289 . C . PASS DP=34;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:21:0:0%:13,8,0,0 0/0:.:9:9:0:0%:5,4,0,0
180 chr1 45293290 . G . PASS DP=34;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:24:0:0%:13,11,0,0 0/0:.:9:7:0:0%:3,4,0,0
181 chr1 45293291 . A . PASS DP=34;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:22:0:0%:11,11,0,0 0/0:.:9:8:0:0%:4,4,0,0
182 chr1 45293292 . G . PASS DP=34;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:24:0:0%:14,10,0,0 0/0:.:9:7:0:0%:4,3,0,0
183 chr1 45293293 . G . PASS DP=34;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:23:0:0%:14,9,0,0 0/0:.:9:7:0:0%:5,2,0,0
184 chr1 45293294 . C . PASS DP=34;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:23:0:0%:12,11,0,0 0/0:.:9:7:0:0%:3,4,0,0
185 chr1 45293295 . A . PASS DP=34;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:23:0:0%:14,9,0,0 0/0:.:9:9:0:0%:5,4,0,0
186 chr1 45293296 . C . PASS DP=34;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:25:0:0%:14,11,0,0 0/0:.:9:9:0:0%:5,4,0,0
187 chr1 45293297 . C . PASS DP=34;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:24:0:0%:13,11,0,0 0/0:.:9:8:0:0%:4,4,0,0
188 chr1 45293298 . A . PASS DP=34;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:24:0:0%:14,10,0,0 0/0:.:9:7:0:0%:5,2,0,0
189 chr1 45293299 . C . PASS DP=34;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:25:0:0%:14,11,0,0 0/0:.:9:9:0:0%:5,4,0,0
190 chr1 45293300 . A . PASS DP=34;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:22:0:0%:14,8,0,0 0/0:.:9:8:0:0%:5,3,0,0
191 chr1 45293301 . T . PASS DP=34;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:24:0:0%:13,11,0,0 0/0:.:9:8:0:0%:5,3,0,0
192 chr1 45293302 . C . PASS DP=34;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:25:0:0%:14,11,0,0 0/0:.:9:9:0:0%:5,4,0,0
193 chr1 45293303 . C . PASS DP=34;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:24:0:0%:13,11,0,0 0/0:.:9:9:0:0%:5,4,0,0
194 chr1 45293304 . G . PASS DP=34;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:24:0:0%:13,11,0,0 0/0:.:9:8:0:0%:4,4,0,0
195 chr1 45293305 . T . PASS DP=34;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:23:0:0%:12,11,0,0 0/0:.:9:9:0:0%:5,4,0,0
196 chr1 45293306 . C . PASS DP=34;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:25:0:0%:14,11,0,0 0/0:.:9:8:0:0%:4,4,0,0
197 chr1 45293307 . A . PASS DP=34;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:24:0:0%:13,11,0,0 0/0:.:9:9:0:0%:5,4,0,0
198 chr1 45293308 . G . PASS DP=34;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:25:25:0:0%:14,11,0,0 0/0:.:9:8:0:0%:5,3,0,0
199 chr1 45293309 . G . PASS DP=33;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:24:23:0:0%:13,10,0,0 0/0:.:9:9:0:0%:5,4,0,0
200 chr1 45293310 . G . PASS DP=32;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:23:22:0:0%:12,10,0,0 0/0:.:9:8:0:0%:5,3,0,0
201 chr1 45293484 . T . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:50:0:0%:27,23,0,0 0/0:.:10:8:0:0%:5,3,0,0
202 chr1 45293485 . A . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:27,26,0,0 0/0:.:10:9:0:0%:5,4,0,0
203 chr1 45293486 . A . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:52:0:0%:26,26,0,0 0/0:.:10:10:0:0%:5,5,0,0
204 chr1 45293487 . G . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:52:0:0%:27,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
205 chr1 45293488 . T . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:52:0:0%:26,26,0,0 0/0:.:10:6:0:0%:5,1,0,0
206 chr1 45293489 . C . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:27,26,0,0 0/0:.:10:10:0:0%:5,5,0,0
207 chr1 45293490 . T . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:27,26,0,0 0/0:.:10:10:0:0%:5,5,0,0
208 chr1 45293491 . C . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:52:0:0%:27,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
209 chr1 45293492 . T . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:52:0:0%:27,25,0,0 0/0:.:10:9:0:0%:5,4,0,0
210 chr1 45293493 . G . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:27,26,0,0 0/0:.:10:5:0:0%:5,0,0,0
211 chr1 45293494 . C . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:27,26,0,0 0/0:.:10:9:0:0%:5,4,0,0
212 chr1 45293495 . C . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:27,26,0,0 0/0:.:10:10:0:0%:5,5,0,0
213 chr1 45293496 . C . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:27,26,0,0 0/0:.:10:8:0:0%:5,3,0,0
214 chr1 45293497 . T . PASS DP=64;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:54:53:0:0%:26,27,0,0 0/0:.:10:7:0:0%:4,3,0,0
215 chr1 45293498 . G . PASS DP=64;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:54:54:0:0%:27,27,0,0 0/0:.:10:8:0:0%:5,3,0,0
216 chr1 45293499 . C . PASS DP=64;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:54:54:0:0%:27,27,0,0 0/0:.:10:8:0:0%:4,4,0,0
217 chr1 45293500 . T . PASS DP=64;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:54:52:0:0%:26,26,0,0 0/0:.:10:10:0:0%:5,5,0,0
218 chr1 45293501 . C . PASS DP=64;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:54:51:0:0%:27,24,0,0 0/0:.:10:8:0:0%:5,3,0,0
219 chr1 45293502 . T . PASS DP=64;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:54:53:0:0%:27,26,0,0 0/0:.:10:8:0:0%:5,3,0,0
220 chr1 45293503 . G . PASS DP=64;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:54:54:0:0%:27,27,0,0 0/0:.:10:9:0:0%:5,4,0,0
221 chr1 45293504 . C . PASS DP=64;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:54:53:0:0%:26,27,0,0 0/0:.:10:9:0:0%:5,4,0,0
222 chr1 45293505 . C . PASS DP=64;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:54:53:0:0%:26,27,0,0 0/0:.:10:9:0:0%:5,4,0,0
223 chr1 45293506 . C . PASS DP=64;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:54:53:0:0%:27,26,0,0 0/0:.:10:9:0:0%:5,4,0,0
224 chr1 45293507 . A . PASS DP=64;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:54:54:0:0%:27,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
225 chr1 45293508 . G . PASS DP=64;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:54:54:0:0%:27,27,0,0 0/0:.:10:9:0:0%:5,4,0,0
226 chr1 45293509 . T . PASS DP=64;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:54:52:0:0%:26,26,0,0 0/0:.:10:10:0:0%:5,5,0,0
227 chr1 45293510 . C . PASS DP=64;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:54:52:0:0%:27,25,0,0 0/0:.:10:9:0:0%:5,4,0,0
228 chr1 45293511 . T . PASS DP=64;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:54:54:0:0%:27,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
229 chr1 45293512 . T . PASS DP=64;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:54:54:0:0%:27,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
230 chr1 45293513 . A . PASS DP=64;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:54:54:0:0%:27,27,0,0 0/0:.:10:9:0:0%:5,4,0,0
231 chr1 45293514 . C . PASS DP=64;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:54:53:0:0%:27,26,0,0 0/0:.:10:10:0:0%:5,5,0,0
232 chr1 45293515 . C . PASS DP=64;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:54:53:0:0%:27,26,0,0 0/0:.:10:10:0:0%:5,5,0,0
233 chr1 45293516 . T . PASS DP=64;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:54:53:0:0%:27,26,0,0 0/0:.:10:10:0:0%:5,5,0,0
234 chr1 45293517 . T . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
235 chr1 45293518 . A G . PASS DP=63;SOMATIC;SS=2;SSC=34;GPV=1E0;SPV=3.5255E-4 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/1:.:10:6:4:40%:3,3,2,2
236 chr1 45293519 . G . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:52:0:0%:26,26,0,0 0/0:.:10:10:0:0%:5,5,0,0
237 chr1 45293520 . C . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:9:0:0%:5,4,0,0
238 chr1 45293521 . A . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
239 chr1 45293522 . T . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
240 chr1 45293523 . G T . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=8.3871E-1 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:51:1:1.92%:25,26,0,1 0/0:.:10:10:0:0%:5,5,0,0
241 chr1 45293524 . T . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
242 chr1 45293525 . G . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
243 chr1 45293526 . A . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
244 chr1 45293527 . C . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:9:0:0%:5,4,0,0
245 chr1 45293528 . T . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
246 chr1 45293529 . G . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
247 chr1 45293530 . G . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
248 chr1 45293531 . A . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
249 chr1 45293532 . G . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
250 chr1 45293533 . C . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
251 chr1 45293534 . A . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
252 chr1 45293535 . G . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:9:0:0%:5,4,0,0
253 chr1 45293536 . C . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:52:0:0%:25,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
254 chr1 45293537 . A . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
255 chr1 45293538 . A . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
256 chr1 45293539 . C . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
257 chr1 45293540 . G . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
258 chr1 45293541 . G . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
259 chr1 45293542 . G . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:52:0:0%:26,26,0,0 0/0:.:10:10:0:0%:5,5,0,0
260 chr1 45293543 . G . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:52:0:0%:26,26,0,0 0/0:.:10:10:0:0%:5,5,0,0
261 chr1 45293544 . C . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
262 chr1 45293545 . A . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
263 chr1 45293546 . A . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
264 chr1 45293547 . A . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
265 chr1 45293548 . C . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
266 chr1 45293549 . T . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
267 chr1 45293550 . G . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
268 chr1 45293551 . A . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
269 chr1 45293552 . T . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:52:0:0%:26,26,0,0 0/0:.:10:10:0:0%:5,5,0,0
270 chr1 45293553 . A . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
271 chr1 45293554 . G . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:52:0:0%:26,26,0,0 0/0:.:10:10:0:0%:5,5,0,0
272 chr1 45293555 . C . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:52:0:0%:26,26,0,0 0/0:.:10:10:0:0%:5,5,0,0
273 chr1 45293556 . G . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
274 chr1 45293557 . G . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
275 chr1 45293558 . G . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
276 chr1 45293559 . C . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:52:0:0%:25,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
277 chr1 45293560 . G . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:9:0:0%:4,5,0,0
278 chr1 45293561 . A . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
279 chr1 45293562 . A . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:52:0:0%:25,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
280 chr1 45293563 . A . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:51:0:0%:25,26,0,0 0/0:.:10:10:0:0%:5,5,0,0
281 chr1 45293564 . T . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:51:0:0%:25,26,0,0 0/0:.:10:10:0:0%:5,5,0,0
282 chr1 45293565 . G . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:52:0:0%:26,26,0,0 0/0:.:10:10:0:0%:5,5,0,0
283 chr1 45293566 . G . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
284 chr1 45293567 . G . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:51:0:0%:26,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
285 chr1 45293568 . C . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
286 chr1 45293569 . A . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
287 chr1 45293570 . A . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
288 chr1 45293571 . G . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
289 chr1 45293572 . A . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
290 chr1 45293573 . T . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
291 chr1 45293574 . T . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
292 chr1 45293575 . C . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
293 chr1 45293576 . C . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
294 chr1 45293577 . A . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
295 chr1 45293578 . G . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:51:0:0%:25,26,0,0 0/0:.:10:9:0:0%:4,5,0,0
296 chr1 45293579 . C . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:53:0:0%:26,27,0,0 0/0:.:10:10:0:0%:5,5,0,0
297 chr1 45293580 . G . PASS DP=63;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:53:48:0:0%:21,27,0,0 0/0:.:10:9:0:0%:4,5,0,0
298 chr1 45293581 . G . PASS DP=62;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:52:52:0:0%:26,26,0,0 0/0:.:10:9:0:0%:4,5,0,0
299 chr1 45293582 . G . PASS DP=62;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:52:52:0:0%:26,26,0,0 0/0:.:10:9:0:0%:4,5,0,0
300 chr1 45293583 . C . PASS DP=62;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:52:51:0:0%:25,26,0,0 0/0:.:10:9:0:0%:4,5,0,0
301 chr1 45293584 . A . PASS DP=62;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:52:50:0:0%:26,24,0,0 0/0:.:10:9:0:0%:4,5,0,0
302 chr1 45293585 . C . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:49:0:0%:24,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
303 chr1 45293586 . A . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:50:0:0%:25,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
304 chr1 45293587 . G . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:49:0:0%:24,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
305 chr1 45293588 . G . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:49:0:0%:24,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
306 chr1 45293589 . G . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:50:0:0%:25,25,0,0 0/0:.:10:9:0:0%:4,5,0,0
307 chr1 45293590 . C . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:49:0:0%:24,25,0,0 0/0:.:10:5:0:0%:0,5,0,0
308 chr1 45293591 . A . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:50:0:0%:25,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
309 chr1 45293592 . G . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:50:0:0%:25,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
310 chr1 45293593 . G . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:50:0:0%:25,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
311 chr1 45293594 . G . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:49:0:0%:24,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
312 chr1 45293595 . A . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:49:0:0%:25,24,0,0 0/0:.:10:9:0:0%:4,5,0,0
313 chr1 45293596 . C . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:49:0:0%:24,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
314 chr1 45293597 . T . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:49:0:0%:24,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
315 chr1 45293598 . T . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:48:0:0%:23,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
316 chr1 45293599 . G . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:49:0:0%:25,24,0,0 0/0:.:10:10:0:0%:5,5,0,0
317 chr1 45293600 . C . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:49:0:0%:24,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
318 chr1 45293601 . A . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:49:0:0%:24,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
319 chr1 45293602 . G . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:50:0:0%:25,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
320 chr1 45293603 . G . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:49:0:0%:24,25,0,0 0/0:.:10:9:0:0%:4,5,0,0
321 chr1 45293604 . C . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:49:0:0%:24,25,0,0 0/0:.:10:5:0:0%:0,5,0,0
322 chr1 45293605 . T . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:50:0:0%:25,25,0,0 0/0:.:10:9:0:0%:4,5,0,0
323 chr1 45293606 . G . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:49:0:0%:24,25,0,0 0/0:.:10:8:0:0%:3,5,0,0
324 chr1 45293607 . C . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:49:0:0%:24,25,0,0 0/0:.:10:5:0:0%:0,5,0,0
325 chr1 45293608 . C . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:50:0:0%:25,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
326 chr1 45293609 . T . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:49:0:0%:24,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
327 chr1 45293610 . T . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:50:0:0%:25,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
328 chr1 45293611 . C . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:49:0:0%:24,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
329 chr1 45293612 . T . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:50:0:0%:25,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
330 chr1 45293613 . G . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:50:0:0%:25,25,0,0 0/0:.:10:8:0:0%:3,5,0,0
331 chr1 45293614 . C . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:49:0:0%:24,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
332 chr1 45293615 . C . PASS DP=60;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:50:49:0:0%:24,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
333 chr1 45293616 . T . PASS DP=57;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:47:47:0:0%:22,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
334 chr1 45293617 . T . PASS DP=57;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:47:46:0:0%:21,25,0,0 0/0:.:10:5:0:0%:0,5,0,0
335 chr1 45293618 . G . PASS DP=57;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:47:46:0:0%:21,25,0,0 0/0:.:10:5:0:0%:0,5,0,0
336 chr1 45293619 . T . PASS DP=57;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:47:46:0:0%:21,25,0,0 0/0:.:10:9:0:0%:4,5,0,0
337 chr1 45293620 . C . PASS DP=57;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:47:47:0:0%:22,25,0,0 0/0:.:10:9:0:0%:4,5,0,0
338 chr1 45293621 . T . PASS DP=57;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:47:47:0:0%:22,25,0,0 0/0:.:10:6:0:0%:1,5,0,0
339 chr1 45293622 . C . PASS DP=57;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:47:47:0:0%:22,25,0,0 0/0:.:10:10:0:0%:5,5,0,0
340 chr5 156750993 . T . PASS DP=30;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:22:22:0:0%:10,12,0,0 0/0:.:8:7:0:0%:3,4,0,0
341 chr5 156750994 . G . PASS DP=30;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:22:22:0:0%:10,12,0,0 0/0:.:8:8:0:0%:4,4,0,0
342 chr5 156750995 . A . PASS DP=30;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:22:22:0:0%:10,12,0,0 0/0:.:8:8:0:0%:4,4,0,0
343 chr5 156750996 . G . PASS DP=27;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:19:19:0:0%:10,9,0,0 0/0:.:8:8:0:0%:4,4,0,0
344 chr5 156750997 . G . PASS DP=27;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:19:19:0:0%:10,9,0,0 0/0:.:8:8:0:0%:4,4,0,0
345 chr5 156750998 . A . PASS DP=27;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:19:19:0:0%:10,9,0,0 0/0:.:8:8:0:0%:4,4,0,0
346 chr5 156750999 . G . PASS DP=27;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:19:19:0:0%:10,9,0,0 0/0:.:8:8:0:0%:4,4,0,0
347 chr5 156751000 . C . PASS DP=27;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:19:19:0:0%:10,9,0,0 0/0:.:8:8:0:0%:4,4,0,0
348 chr5 156751001 . A . PASS DP=27;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:19:19:0:0%:10,9,0,0 0/0:.:8:7:0:0%:4,3,0,0
349 chr5 156751006 . G . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
350 chr5 156751007 . G . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
351 chr5 156751008 . A . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
352 chr5 156751009 . T . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
353 chr5 156751010 . G . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
354 chr5 156751011 . G . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
355 chr5 156751012 . A . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:19:0:0%:9,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
356 chr5 156751013 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:7:0:0%:4,3,0,0
357 chr5 156751014 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
358 chr5 156751015 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
359 chr5 156751016 . A . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
360 chr5 156751017 . T . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
361 chr5 156751018 . T . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:7:0:0%:4,3,0,0
362 chr5 156751019 . G . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
363 chr5 156751020 . T . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:7:0:0%:4,3,0,0
364 chr5 156751021 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:7:0:0%:4,3,0,0
365 chr5 156751022 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
366 chr5 156751023 . T . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
367 chr5 156751024 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:19:0:0%:10,9,0,0 0/0:.:8:8:0:0%:4,4,0,0
368 chr5 156751025 . G . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:19:0:0%:9,10,0,0 0/0:.:8:7:0:0%:3,4,0,0
369 chr5 156751026 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:7:0:0%:3,4,0,0
370 chr5 156751027 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
371 chr5 156751028 . A . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
372 chr5 156751029 . T . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:19:0:0%:10,9,0,0 0/0:.:8:7:0:0%:4,3,0,0
373 chr5 156751030 . A . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:19:0:0%:9,10,0,0 0/0:.:8:7:0:0%:4,3,0,0
374 chr5 156751031 . G . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
375 chr5 156751032 . A . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:19:0:0%:9,10,0,0 0/0:.:8:7:0:0%:4,3,0,0
376 chr5 156751033 . G . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:7:0:0%:4,3,0,0
377 chr5 156751034 . G . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:7:0:0%:4,3,0,0
378 chr5 156751035 . A . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:7:0:0%:4,3,0,0
379 chr5 156751036 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
380 chr5 156751037 . T . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
381 chr5 156751038 . T . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:7:0:0%:4,3,0,0
382 chr5 156751039 . T . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
383 chr5 156751040 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
384 chr5 156751041 . A . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
385 chr5 156751042 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
386 chr5 156751043 . A . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
387 chr5 156751044 . A . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
388 chr5 156751045 . A . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:19:0:0%:10,9,0,0 0/0:.:8:8:0:0%:4,4,0,0
389 chr5 156751046 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
390 chr5 156751047 . A . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:7:0:0%:4,3,0,0
391 chr5 156751048 . G . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:19:0:0%:9,10,0,0 0/0:.:8:6:0:0%:2,4,0,0
392 chr5 156751049 . T . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
393 chr5 156751050 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
394 chr5 156751051 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
395 chr5 156751052 . T . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
396 chr5 156751053 . T . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
397 chr5 156751054 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
398 chr5 156751055 . T . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
399 chr5 156751056 . T . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
400 chr5 156751057 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
401 chr5 156751058 . T . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:19:0:0%:10,9,0,0 0/0:.:8:8:0:0%:4,4,0,0
402 chr5 156751059 . T . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
403 chr5 156751060 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
404 chr5 156751061 . A . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:19:0:0%:9,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
405 chr5 156751062 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
406 chr5 156751063 . A . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:6:0:0%:4,2,0,0
407 chr5 156751064 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
408 chr5 156751065 . A . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:18:0:0%:8,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
409 chr5 156751066 . T . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
410 chr5 156751067 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:7:0:0%:4,3,0,0
411 chr5 156751068 . T . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:7:0:0%:4,3,0,0
412 chr5 156751069 . G . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
413 chr5 156751070 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
414 chr5 156751071 . T . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
415 chr5 156751072 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
416 chr5 156751073 . A . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:20:0:0%:10,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
417 chr5 156751074 . A . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:19:0:0%:9,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
418 chr5 156751075 . C . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:18:0:0%:8,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
419 chr5 156751076 . A . PASS DP=28;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:20:18:0:0%:8,10,0,0 0/0:.:8:5:0:0%:2,3,0,0
420 chr5 156751077 . T . PASS DP=26;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:18:17:0:0%:7,10,0,0 0/0:.:8:6:0:0%:2,4,0,0
421 chr5 156751078 . C . PASS DP=24;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:16:15:0:0%:5,10,0,0 0/0:.:8:8:0:0%:4,4,0,0
422 chr5 156788529 . C . PASS DP=20;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:11:9:0:0%:4,5,0,0 0/0:.:9:7:0:0%:3,4,0,0
423 chr5 156788530 . T . PASS DP=21;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:12:12:0:0%:6,6,0,0 0/0:.:9:6:0:0%:2,4,0,0
424 chr5 156788531 . C CA . PASS DP=21;SS=1;SSC=9;GPV=1.9541E-4;SPV=1.1491E-1 GT:GQ:DP:RD:AD:FREQ:DP4 0/1:.:11:7:4:36.36%:4,3,2,2 1/1:.:10:2:6:75%:1,1,3,3
425 chr5 156788532 . A . PASS DP=22;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:12:8:0:0%:5,3,0,0 0/0:.:10:4:0:0%:3,1,0,0
426 chr5 156788533 . A . PASS DP=22;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:12:8:0:0%:5,3,0,0 0/0:.:10:4:0:0%:3,1,0,0
427 chr5 156788534 . A . PASS DP=22;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:12:7:0:0%:5,2,0,0 0/0:.:10:3:0:0%:3,0,0,0
428 chr5 156788535 . A . PASS DP=22;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:12:8:0:0%:5,3,0,0 0/0:.:10:4:0:0%:3,1,0,0
429 chr5 156788536 . C . PASS DP=22;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:12:12:0:0%:7,5,0,0 0/0:.:10:9:0:0%:5,4,0,0
430 chr5 156788537 . A . PASS DP=22;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:12:12:0:0%:7,5,0,0 0/0:.:10:8:0:0%:4,4,0,0
431 chr5 156788538 . G . PASS DP=22;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:12:12:0:0%:7,5,0,0 0/0:.:10:10:0:0%:6,4,0,0
432 chr5 156788539 . A . PASS DP=22;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:12:11:0:0%:7,4,0,0 0/0:.:10:10:0:0%:6,4,0,0
433 chr5 156788540 . C . PASS DP=22;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:12:10:0:0%:5,5,0,0 0/0:.:10:10:0:0%:6,4,0,0
434 chr5 156788541 . G . PASS DP=22;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:12:11:0:0%:6,5,0,0 0/0:.:10:10:0:0%:6,4,0,0
435 chr5 156788542 . T . PASS DP=21;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:11:10:0:0%:5,5,0,0 0/0:.:10:9:0:0%:5,4,0,0
436 chr5 156788543 . G . PASS DP=20;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:10:10:0:0%:6,4,0,0 0/0:.:10:10:0:0%:6,4,0,0
437 chr5 156788544 . T . PASS DP=20;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:10:9:0:0%:5,4,0,0 0/0:.:10:10:0:0%:6,4,0,0
438 chr5 156788545 . T . PASS DP=20;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:10:10:0:0%:6,4,0,0 0/0:.:10:10:0:0%:6,4,0,0
439 chr5 156788546 . C . PASS DP=20;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:10:10:0:0%:6,4,0,0 0/0:.:10:10:0:0%:6,4,0,0
440 chr5 156788547 . C . PASS DP=19;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:10:9:0:0%:5,4,0,0 0/0:.:9:8:0:0%:4,4,0,0
441 chr5 156788548 . A . PASS DP=19;SS=0;SSC=0;GPV=1E0;SPV=1E0 GT:GQ:DP:RD:AD:FREQ:DP4 0/0:.:10:9:0:0%:5,4,0,0 0/0:.:9:9:0:0%:5,4,0,0