Mercurial > repos > geert-vandeweyer > vcf_to_variantdb

comparison VCF_to_VariantDB.pl @ 5:6ddc1c6472ef draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Macro corrections
author geert-vandeweyer
date Fri, 21 Feb 2014 06:38:35 -0500
parents d03a63a57e82
children 04e3bba317f4
comparison
equal deleted inserted replaced
4:7ebc71784e9f 5:6ddc1c6472ef
79 } 79 }
80 else { 80 else {
81 die("ERROR: $content"); 81 die("ERROR: $content");
82 } 82 }
83 83
84 print $opts{'H'}. " was specified as galaxy host\n";
85
84 ############################################### 86 ###############################################
85 ## SEND THE VCF AND BAM FILES FOR PROCESSING ## 87 ## SEND THE VCF AND BAM FILES FOR PROCESSING ##
86 ############################################### 88 ###############################################
87 # filepaths 89 # filepaths
88 my $vcfpath = $opts{'v'}; 90 my $vcfpath = $opts{'v'};