Mercurial > repos > geert-vandeweyer > vcf_to_variantdb

comparison VCF_to_VariantDB.xml @ 4:7ebc71784e9f draft

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Fixed env.sh dependency
author geert-vandeweyer
date Wed, 19 Feb 2014 06:53:47 -0500
parents d03a63a57e82
children 04e3bba317f4
comparison
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3:f2525e35b8e9 4:7ebc71784e9f
3 <expand macro="requirements" /> 3 <expand macro="requirements" />
4 <macros> 4 <macros>
5 <import>VCF_to_VariantDB_macros.xml</import> 5 <import>VCF_to_VariantDB_macros.xml</import>
6 </macros> 6 </macros>
7 <command interpreter="perl"> 7 <command interpreter="perl">
8 VCF_to_DB_reverse.pl 8 VCF_to_VariantDB.pl
9 -H '@URL@' 9 -H '@URL@'
10 -R $__root_dir__ 10 -R $__root_dir__
11 ## input file 11 ## input file
12 -v $input1 12 -v $input1
13 -V $__app__.security.encode_id( '%s' % $input1.id ) 13 -V $__app__.security.encode_id( '%s' % $input1.id )