--- a/README.rst	Tue Sep 05 09:40:27 2023 +0000
+++ b/README.rst	Wed Sep 06 09:50:12 2023 +0000
@@ -1,41 +1,24 @@
-Braker3
+Braker
 =======
 
-This tool is not in IUC because of the license issues with GeneMark and
-ProtHint that makes it impossible to test it using CI.
-
-GeneMark and ProtHint
----------------------
+This tool is not in IUC because of the license issues with GeneMark and ProtHint that makes it impossible to test it using CI.
 
-Braker requires GeneMark to predict gene, but due to licensing issues, we
-are not allowed to distribute GeneMark automatically.
+GeneMark
+---------
 
-Braker also requires ProtHint to use protein sequences as hints to predict
-genes, but, again, due to licensing issues, we are not allowed to distribute
-ProtHint automatically.
+Braker can use GeneMark to predict gene, but due to licensing issues, we are not allowed to distribute GeneMark automatically.
 
-To use Braker3, the Galaxy administrator needs to install
-GeneMark, and set the ``GENEMARK_PATH`` variable on the job destination.
+If you want to use it, the Galaxy administrator needs to install GeneMark, and set the `GENEMARK_PATH` variable on the job destination.
 
-The only working version of GeneMark to install needs to be downloaded from
-http://topaz.gatech.edu/GeneMark/etp.for_braker.tar.gz
-This archive also contains ProtHint and various other tools in specific versions needed by Braker3.
+ProtHint
+---------
+Braker can use ProtHint to use protein sequences as hints to predict genes, but due to licensing issues, we are not allowed to distribute ProtHint automatically.
 
-Unzip it, and set the ``GENEMARK_PATH`` variable to point to the extracted ``bin``
-directory.
-
-Also set the ``PROTHINT_PATH`` variable on the job destination, pointing to the extracted
-``bin/gmes/ProtHint/bin/`` directory
+If you want to use it, the Galaxy administrator needs to install ProtHint, and set the `PROTHINT_PATH` variable on the job destination.
 
 Running tests
--------------
-
-Tests require working GeneMark and ProtHint installations, which means
-both GENEMARK_PATH and PROTHINT_PATH are set in job_conf_braker3.xml.
+--------------
 
-You should then use the ``--job_config_file job_conf_braker3.xml``
-option for planemo commands.
+Tests require working GeneMark and ProtHint installations, which means both GENEMARK_PATH and PROTHINT_PATH are set.
 
-You should also copy a valid GeneMark license (from
-http://topaz.gatech.edu/GeneMark/license_download.cgi) in
-test-data/gm_key_64.
+You should also copy a valid GeneMark license (from http://topaz.gatech.edu/GeneMark/license_download.cgi) in test-data/genemark_license.gm_key