Mercurial > repos > genouest > feelnc2asko
diff test-data/feelnc_lncRNA.gtf @ 0:e323c49b8bcc draft
planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/feelnc2asko commit 92849224db1963d090fbb25d410cc659a5449241
| author | genouest |
|---|---|
| date | Thu, 12 Apr 2018 06:05:23 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/feelnc_lncRNA.gtf Thu Apr 12 06:05:23 2018 -0400 @@ -0,0 +1,28 @@ +GL349622 Cufflinks exon 533485 533534 882 - . gene_id "CUFF.85"; transcript_id "CUFF.85.2"; FPKM "2.3945340028"; conf_hi "2.630871"; conf_lo "2.158197"; cov "214.763323"; exon_number "1"; frac "0.489040"; +GL349622 Cufflinks exon 533586 533675 882 - . gene_id "CUFF.85"; transcript_id "CUFF.85.2"; FPKM "2.3945340028"; conf_hi "2.630871"; conf_lo "2.158197"; cov "214.763323"; exon_number "2"; frac "0.489040"; +GL349622 Cufflinks exon 535570 536159 882 - . gene_id "CUFF.85"; transcript_id "CUFF.85.2"; FPKM "2.3945340028"; conf_hi "2.630871"; conf_lo "2.158197"; cov "214.763323"; exon_number "3"; frac "0.489040"; +GL349622 Cufflinks exon 490324 490331 1000 - . gene_id "CUFF.85"; transcript_id "CUFF.85.1"; FPKM "2.7134838239"; conf_hi "2.976733"; conf_lo "2.450235"; cov "243.369608"; exon_number "1"; frac "0.510960"; +GL349622 Cufflinks exon 531740 531830 1000 - . gene_id "CUFF.85"; transcript_id "CUFF.85.1"; FPKM "2.7134838239"; conf_hi "2.976733"; conf_lo "2.450235"; cov "243.369608"; exon_number "2"; frac "0.510960"; +GL349622 Cufflinks exon 535570 536159 1000 - . gene_id "CUFF.85"; transcript_id "CUFF.85.1"; FPKM "2.7134838239"; conf_hi "2.976733"; conf_lo "2.450235"; cov "243.369608"; exon_number "3"; frac "0.510960"; +GL349622 Cufflinks exon 604709 604997 1000 - . gene_id "CUFF.110"; transcript_id "CUFF.110.1"; FPKM "0.0961002126"; conf_hi "0.135302"; conf_lo "0.056899"; cov "8.912035"; exon_number "1"; frac "1.000000"; +GL349622 Cufflinks exon 609022 609482 1000 - . gene_id "CUFF.110"; transcript_id "CUFF.110.1"; FPKM "0.0961002126"; conf_hi "0.135302"; conf_lo "0.056899"; cov "8.912035"; exon_number "2"; frac "1.000000"; +GL349622 Cufflinks exon 1160606 1160686 1000 - . gene_id "CUFF.350"; transcript_id "CUFF.350.1"; FPKM "0.1406859378"; conf_hi "0.225523"; conf_lo "0.055849"; cov "12.977983"; exon_number "1"; frac "1.000000"; +GL349622 Cufflinks exon 1160750 1161032 1000 - . gene_id "CUFF.350"; transcript_id "CUFF.350.1"; FPKM "0.1406859378"; conf_hi "0.225523"; conf_lo "0.055849"; cov "12.977983"; exon_number "2"; frac "1.000000"; +GL349622 Cufflinks exon 218384 218748 1000 - . gene_id "CUFF.77"; transcript_id "CUFF.77.1"; FPKM "0.0743883680"; conf_hi "0.114151"; conf_lo "0.034626"; cov "6.927126"; exon_number "1"; frac "1.000000"; +GL349622 Cufflinks exon 219422 219582 1000 - . gene_id "CUFF.77"; transcript_id "CUFF.77.1"; FPKM "0.0743883680"; conf_hi "0.114151"; conf_lo "0.034626"; cov "6.927126"; exon_number "2"; frac "1.000000"; +GL349622 Cufflinks exon 219650 219722 1000 - . gene_id "CUFF.77"; transcript_id "CUFF.77.1"; FPKM "0.0743883680"; conf_hi "0.114151"; conf_lo "0.034626"; cov "6.927126"; exon_number "3"; frac "1.000000"; +GL349622 Cufflinks exon 2021789 2021806 518 - . gene_id "CUFF.135"; transcript_id "CUFF.135.2"; FPKM "0.0207553118"; conf_hi "0.028907"; conf_lo "0.012604"; cov "1.968198"; exon_number "1"; frac "0.530904"; +GL349622 Cufflinks exon 2021900 2022107 518 - . gene_id "CUFF.135"; transcript_id "CUFF.135.2"; FPKM "0.0207553118"; conf_hi "0.028907"; conf_lo "0.012604"; cov "1.968198"; exon_number "2"; frac "0.530904"; +GL349622 Cufflinks exon 2022183 2022321 518 - . gene_id "CUFF.135"; transcript_id "CUFF.135.2"; FPKM "0.0207553118"; conf_hi "0.028907"; conf_lo "0.012604"; cov "1.968198"; exon_number "3"; frac "0.530904"; +GL349622 Cufflinks exon 2022426 2022632 518 - . gene_id "CUFF.135"; transcript_id "CUFF.135.2"; FPKM "0.0207553118"; conf_hi "0.028907"; conf_lo "0.012604"; cov "1.968198"; exon_number "4"; frac "0.530904"; +GL349622 Cufflinks exon 2022873 2023046 518 - . gene_id "CUFF.135"; transcript_id "CUFF.135.2"; FPKM "0.0207553118"; conf_hi "0.028907"; conf_lo "0.012604"; cov "1.968198"; exon_number "5"; frac "0.530904"; +GL349622 Cufflinks exon 2023146 2024788 518 - . gene_id "CUFF.135"; transcript_id "CUFF.135.2"; FPKM "0.0207553118"; conf_hi "0.028907"; conf_lo "0.012604"; cov "1.968198"; exon_number "6"; frac "0.530904"; +GL349622 Cufflinks exon 2024861 2025119 518 - . gene_id "CUFF.135"; transcript_id "CUFF.135.2"; FPKM "0.0207553118"; conf_hi "0.028907"; conf_lo "0.012604"; cov "1.968198"; exon_number "7"; frac "0.530904"; +GL349622 Cufflinks exon 2025186 2025371 518 - . gene_id "CUFF.135"; transcript_id "CUFF.135.2"; FPKM "0.0207553118"; conf_hi "0.028907"; conf_lo "0.012604"; cov "1.968198"; exon_number "8"; frac "0.530904"; +GL349622 Cufflinks exon 2025439 2025624 518 - . gene_id "CUFF.135"; transcript_id "CUFF.135.2"; FPKM "0.0207553118"; conf_hi "0.028907"; conf_lo "0.012604"; cov "1.968198"; exon_number "9"; frac "0.530904"; +GL349622 Cufflinks exon 2025689 2025775 518 - . gene_id "CUFF.135"; transcript_id "CUFF.135.2"; FPKM "0.0207553118"; conf_hi "0.028907"; conf_lo "0.012604"; cov "1.968198"; exon_number "10"; frac "0.530904"; +GL349622 Cufflinks exon 2025850 2026165 518 - . gene_id "CUFF.135"; transcript_id "CUFF.135.2"; FPKM "0.0207553118"; conf_hi "0.028907"; conf_lo "0.012604"; cov "1.968198"; exon_number "11"; frac "0.530904"; +GL349622 Cufflinks exon 1359442 1359624 1000 - . gene_id "CUFF.491"; transcript_id "CUFF.491.1"; FPKM "0.0739312720"; conf_hi "0.114941"; conf_lo "0.032922"; cov "7.121265"; exon_number "1"; frac "1.000000"; +GL349622 Cufflinks exon 1359763 1360152 1000 - . gene_id "CUFF.491"; transcript_id "CUFF.491.1"; FPKM "0.0739312720"; conf_hi "0.114941"; conf_lo "0.032922"; cov "7.121265"; exon_number "2"; frac "1.000000"; +GL349622 Cufflinks exon 400758 401861 1000 - . gene_id "CUFF.80"; transcript_id "CUFF.80.1"; FPKM "0.0766645216"; conf_hi "0.102680"; conf_lo "0.050649"; cov "6.048173"; exon_number "1"; frac "1.000000"; +GL349622 Cufflinks exon 405167 405243 1000 - . gene_id "CUFF.80"; transcript_id "CUFF.80.1"; FPKM "0.0766645216"; conf_hi "0.102680"; conf_lo "0.050649"; cov "6.048173"; exon_number "2"; frac "1.000000";