Mercurial > repos > george-weingart > maaslin

diff MaAsLin_galaxy_ReadMe.txt @ 0:e0b5980139d9

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maaslin
author george-weingart
date Tue, 13 May 2014 22:00:40 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/MaAsLin_galaxy_ReadMe.txt	Tue May 13 22:00:40 2014 -0400
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+Installation instructions for maaslin in a galaxy environment.
+These instructions require the Mercurial versioning system, galaxy, and an internet connection.
+
+1. In the  "galaxy-dist/tools" directory install maaslin by typing in a terminal:
+hg clone https://bitbucket.org/biobakery/maaslin
+
+2. Update member tool_conf.xml  in the galaxy directory adding the following: 
+  <section name="maaslin" id="maaslin">
+    <tool file="maaslin/galaxy/maaslin.xml"/>
+  </section>
+
+3. Update member datatypes_conf.xml  in the galaxy directory adding the following:
+	<datatype extension="maaslin" type="galaxy.datatypes.data:Text" subclass="true" display_in_upload="true"/>
+
+4. Recycle galaxy
+