Mercurial > repos > george-weingart > metaphlan2_hutlab

changeset 3:6bdae6616ca4 draft

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Uploaded
author george-weingart
date Sun, 24 Apr 2016 13:50:37 -0400
parents 2a2df9ca8958
children 88068e88b739
files metaphlan2_hutlab/metaphlan2.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/metaphlan2_hutlab/metaphlan2.xml	Sun Apr 24 13:39:30 2016 -0400
+++ b/metaphlan2_hutlab/metaphlan2.xml	Sun Apr 24 13:50:37 2016 -0400
@@ -7,7 +7,7 @@
 	<description>metagenomic profiler V2</description>
 	<command interpreter="python">metaphlan2.py $input 
 		--mpa_pkl  \${METAPHLAN2_PATH}/db_v20/mpa_v20_m200.pkl    
-		--bowtie2db \${METAPHLAN2_PATH}//db_v20/mpa_v20_m200 
+		--bowtie2db \${METAPHLAN2_PATH}/db_v20/mpa_v20_m200 
 		--input_type  fastq
 		--no_map 
 		--bt2_ps $PresetsForBowtie2