Mercurial > repos > george-weingart > micropita
view src/breadcrumbs/demo_input/GreenGenesCore-May09.ref.tre @ 0:2f4f6f08c8c4 draft
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| author | george-weingart |
|---|---|
| date | Tue, 13 May 2014 21:58:57 -0400 |
| parents | |
| children |
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:0.05186,72513:0.04854)Eubacterium_minutum:0.05485):0.00251,78354:0.09813):0.00506):0.01151,(43267:0.03431,43339:0.02984)p-648-a5:0.03065):0.00412,(224206:0.05621,52379:0.02581):0.00585):0.00492,(176276:0.04919,180402:0.08475):0.02528)Mogibacterium:0.00328,14149:0.04659):0.01154,14158:0.04785):0.01407,14148:0.04439):0.01575,((14178:0.05921,86132:0.08475)Eubacteriaceae_bacterium_P4P_50_P4:0.02659,51973:0.04677)Frigovirgula_patagoniensis:0.03577):0.01340,(((((((((((184671:0.03223,185952:0.06955):0.03890,174734:0.03814):0.00611,162021:0.10553):0.00174,199413:0.03647):0.00339,44695:0.02258):0.01065,14228:0.03679):0.00740,135311:0.03095)Clostridium_bifermentans:0.01809,(14188:0.05519,33116:0.03782):0.01009)Peptostreptococcus_anaerobius:0.02389,((14169:0.01939,224798:0.02661)Clostridium_formicaceticum:0.01643,14174:0.04194)Clostridium_felsineum:0.01156):0.00497,105499:0.05280):0.01078,51694:0.04479):0.00988):0.00495,(((((107660:0.03445,156470:0.03635):0.01491,113661:0.10053):0.00758,((14135:0.02263,85424:0.02182):0.00903,218303:0.05058):0.00331):0.00658,103172:0.04687):0.00414,((14132:0.02754,41951:0.02924):0.01902,85846:0.06877):0.00671):0.00571):0.00739,(14245:0.04523,28721:0.04958):0.02424):0.00414,((106726:0.01990,33448:0.04443):0.01577,132641:0.05979):0.02418):0.00995,((((((((70787:0.07674,83665:0.06371):0.00682,87735:0.06306):0.00248,84198:0.10092):0.01020,99351:0.08710):0.00589,((75475:0.04919,83175:0.06616):0.00337,99981:0.07509):0.00084)Peptoniphilus:0.00582,(14275:0.03873,68341:0.04116):0.01663):0.00991,(((((114836:0.05697,38592:0.04190):0.01049,103341:0.04113):0.00906,14263:0.02823):0.00816,((223099:0.05244,81585:0.06134)KSC6-33:0.03044,35017:0.04516):0.00916):0.00572,99474:0.05323):0.00582):0.00741,157172:0.06785):0.00921)Peptostreptococcaceae:0.01803,99126:0.05263):0.00250,((((14240:0.03476,46867:0.04843):0.00501,157142:0.08592)Acetobacterium:0.01511,89746:0.04358):0.01492,((135410:0.07745,145515:0.04754):0.01447,104008:0.04793)Rs-H81:0.02385)Eubacteriaceae:0.01657):0.01910):0.00911,((((((((((((((((((((((146761:0.04573,185374:0.05089):0.00438,176925:0.07222):0.00437,146392:0.04400):0.00261,144247:0.07075):0.00353,(114807:0.05488,150154:0.06299):0.00507):0.00248,((142033:0.08737,169989:0.08778)Rs-H35:0.02868,14181:0.09106)Rs-G08:0.02208):0.01334,111211:0.05650):0.00501,(158015:0.03871,183202:0.07385):0.01517):0.01243,165063:0.09445):0.01612,((((220301:0.05124,224204:0.05032):0.00504,78199:0.07074):0.00669,68349:0.07270):0.00503,(111555:0.05675,148781:0.05464):0.02038):0.00659):0.00580,(110842:0.05004,146376:0.05551):0.00168)Clostridiales_bacterium_JN18_A56_K:0.02146,114843:0.07506)Clostridiales_bacterium_JN18_A89_K*:0.03037,(((((108716:0.03150,110296:0.03067):0.00661,(180895:0.07301,190523:0.08085)B380:0.02724):0.00330,188183:0.02545):0.00656,(((180585:0.04333,191738:0.04153):0.03596,107464:0.03632)LG58:0.01244,110847:0.02665):0.00082):0.00327,111250:0.02906)BCf4-07:0.03363):0.01164,(101433:0.05452,99789:0.03482):0.01174):0.00658,14133:0.03955):0.00328,(17311:0.04191,34789:0.07775):0.01806):0.00246,204369:0.05760)Catabacter:0.00582,(144429:0.04248,178394:0.04580)LQ86:0.02108):0.00578,((((181180:0.03556,192164:0.03986):0.01571,189012:0.18718):0.04486,111274:0.06860)RL302_aal95f07:0.02520,(195106:0.06820,195548:0.05768):0.02318)ELAND_60:0.01172):0.01164,210805:0.05663):0.02176,169056:0.06184):0.00333,((109644:0.04204,16087:0.05497):0.01347,93487:0.09620):0.00849):0.02064)Clostridia:0.01402,(((45167:0.05220,93440:0.06746):0.02634,(62673:0.05242,62675:0.05726):0.01686)Anaerobrancaceae:0.01584,136803:0.06543):0.00084):0.01151,((((((((((((((((((((((((((174092:0.07052,190255:0.06525):0.00631,178986:0.02549):0.06521,164187:0.05843):0.00255,(130403:0.00969,133930:0.06866)Lactobacillus_iners:0.02937):0.00986,((21096:0.00968,88892:0.01373)Lactobacillus_delbrueckii:0.04072,51715:0.01868)Lactobacillus:0.01068):0.00737,((178564:0.05532,192175:0.05820):0.01158,193690:0.01951):0.05646):0.00912,177499:0.03958):0.00822,167772:0.07068):0.00502,(((((((131877:0.05148,187332:0.02037):0.05949,15143:0.02670):0.00166,233451:0.03073):0.00246,21772:0.02121)Lactobacillus_reuteri:0.01966,107485:0.01777)Lactobacillus_fermentum:0.03436,(15152:0.02116,15156:0.00810)Pediococcus:0.01964):0.00413,(((108027:0.01777,15164:0.02829):0.00165,58041:0.04355):0.00164,(15179:0.03554,26176:0.04619):0.01088):0.00573):0.00574):0.00327,(((96727:0.03877,97946:0.02097):0.00827,111332:0.02346):0.00408,130744:0.03640):0.01885):0.00904,(107854:0.04694,15221:0.01131)Lactobacillus_casei:0.02150)Lactobacillaceae:0.01712,((((((((((146681:0.10535,14917:0.06866):0.00869,178759:0.06864):0.01089,(110120:0.05740,15693:0.06853):0.01189)NB1-n:0.01741,(153403:0.05008,155994:0.04834):0.01587):0.00500,(134601:0.05893,182108:0.03407):0.01666)Turicibacter_sanguinis:0.01741,50458:0.06159)Turicibacter:0.02012,((15061:0.02984,48276:0.03145):0.01159,28361:0.04176):0.00494):0.00247,48237:0.06063):0.00334,((114822:0.03871,15241:0.04293):0.01498,55895:0.05161):0.02155)Aerococcaceae:0.02060,(((140940:0.04608,151398:0.04450):0.00336,(172032:0.08646,172558:0.01714)aab18f10:0.08576):0.00664,16452:0.02751)Carnobacteriaceae:0.00163):0.00328):0.01148,(((107061:0.06058,136001:0.07411):0.00264,(170087:0.12267,62895:0.01132):0.00258):0.00572,164676:0.07205):0.00251):0.00164,((((((((((((185556:0.03401,196718:0.03144):0.02002,190336:0.06463):0.04930,(205757:0.00242,221080:0.03405):0.00000):0.00165,100119:0.02504):0.00082,55342:0.02777):0.00491,50448:0.01212)Streptococcus:0.01218,15483:0.05063):0.02577,108351:0.02264)Streptococcaceae:0.01319,78015:0.05177):0.00499,110020:0.06031):0.02163,((((15110:0.02661,67688:0.02683):0.01816,67686:0.01545):0.00977,(216931:0.06396,76923:0.01696)Weissella:0.01585):0.01559,134006:0.10280)Leuconostoc:0.02214):0.02667,81912:0.04839):0.00919)Lactobacillales:0.02697,53770:0.02991):0.00994,(((((((142023:0.01278,165813:0.10801):0.00700,146872:0.00809):0.00489,217912:0.02429):0.00164,14894:0.00890):0.01138,(165963:0.04456,173296:0.08860):0.00173):0.02287,64393:0.01618):0.00247,(145617:0.04773,28012:0.03236):0.02598)Staphylococcaceae:0.02625):0.00329,((((((((((14990:0.02668,156286:0.05209):0.00668,147938:0.06066):0.00000,141968:0.02393):0.00898,203909:0.05963):0.00414,48079:0.03756)Planococcaceae:0.02144,(218836:0.04195,224949:0.04034):0.01399):0.00740,(104534:0.08808,216781:0.04021):0.01241):0.01233,(((((14540:0.06446,83619:0.07674):0.01620,151888:0.03630)Geobacillus_debilis:0.02483,58677:0.01855):0.02548,58675:0.03163):0.00742,14575:0.02184):0.00899):0.00245,(((129409:0.07486,211845:0.06089):0.00427,175339:0.06494):0.01507,(173100:0.08799,40011:0.05551)Bacillus_cereus:0.02957):0.00332):0.00327,(((((191576:0.03747,38338:0.06088):0.00762,128618:0.00081):0.01299,14754:0.00405):0.00244,165114:0.09306):0.01267,190564:0.07201)Bacillus:0.01922):0.00984):0.00245,(((137867:0.04693,139299:0.01537)Sporolactobacillus:0.07146,54543:0.02344):0.01084,(206482:0.02689,36300:0.04372)Marinococcus:0.05558):0.01573):0.00164,(((14604:0.01774,14611:0.03079):0.00000,106243:0.02021):0.00570,128093:0.04298)Halobacillus:0.00578):0.00326,15026:0.04839):0.00414,((((112113:0.01535,26206:0.02742):0.01148,22975:0.04040):0.00248,144022:0.03231)Thermoactinomycetaceae:0.02383,14468:0.04927):0.00915):0.00246,((((((((((132693:0.02423,187176:0.02549):0.01154,39053:0.06490):0.00334,(104054:0.01856,163693:0.07342):0.00588):0.00245,(((14405:0.06835,51767:0.02989):0.01762,110470:0.11516):0.00511,91160:0.03808):0.00412):0.00814,96700:0.01776):0.00328,141630:0.04710):0.00165,80984:0.01614):0.01383,(167450:0.08174,210271:0.05013):0.00171):0.00821,137955:0.06710):0.01672,((209244:0.08319,67396:0.06036):0.00345,103446:0.01292)Brevibacillus_brevis:0.05032)Paenibacillaceae:0.00831):0.00820,(109064:0.05908,182726:0.06818):0.02380)Bacilli:0.00828,(((((157680:0.02636,167279:0.04113):0.00249,212471:0.05973)Bacillales:0.04476,14331:0.05897):0.00505,107003:0.03745):0.00659,14348:0.05259)Alicyclobacillus:0.03231):0.00249,(((((((((((((((((114509:0.04443,23473:0.06202):0.02025,(114581:0.06726,43971:0.05782):0.00766)BCf4-19:0.03071,((32823:0.08844,77895:0.03554):0.00768,78268:0.05959):0.00249)BCf7-05:0.04661,15854:0.06063):0.00000,(145549:0.06306,15811:0.05331):0.01954):0.00498,15832:0.05174):0.02155,(((106362:0.07404,15860:0.07820)Mycoplasma_haemocanis:0.03614,15859:0.12355):0.07434,15837:0.07416)Mycoplasma_haemofelis:0.03190)Mycoplasma_haemomuris:0.07254,((102371:0.07934,160113:0.10434):0.04939,(214741:0.10008,219640:0.08536)Elev_16S_1754:0.09807):0.01214):0.00171,((((((103186:0.04766,220788:0.07345)Mycoplasma_ovipneumoniae:0.03152,70042:0.03551):0.02070,(137538:0.05811,58394:0.05565):0.00254):0.00494,((15899:0.06618,79153:0.05950):0.01194,23718:0.03629):0.01399):0.00495,36302:0.06250):0.00249,(108671:0.05726,155625:0.07748):0.01534)Mycoplasma:0.06595)Mycoplasmatales:0.00596,((((150616:0.08814,163407:0.04194):0.05544,101955:0.04194):0.01755,206850:0.06295):0.00669,29463:0.06371)Spiroplasma_citri:0.01501):0.02505,((((((104358:0.06761,210102:0.06093):0.01582,42538:0.07041)adhufec202:0.02750,42395:0.05105):0.00693,((191556:0.08588,52403:0.04268):0.00932,182398:0.06327):0.00666):0.00248,(232434:0.04424,50779:0.04403)p-3870-23G5:0.01467):0.01075,15698:0.08221)RF39:0.04804):0.00677,(((((((55569:0.04681,62523:0.03468)Candidatus_Phytoplasma:0.02501,15696:0.08198):0.00422,166536:0.07168):0.00755,(15695:0.04518,30323:0.05165):0.00588):0.02546,(15708:0.07512,179979:0.05259):0.01360):0.00579,15703:0.07314):0.01758,(15704:0.08602,62666:0.08071):0.01901)Acholeplasmatales:0.00837):0.00416,((((((((((185382:0.10415,193776:0.04835):0.03098,174166:0.02969):0.00261,190225:0.10348):0.00625,50433:0.01306):0.00244,(((176560:0.04153,184230:0.01610):0.01043,(182229:0.04657,199714:0.06037):0.00798):0.00686,175094:0.08149):0.02124)Eubacterium_biforme:0.02469,((((((130091:0.05206,230759:0.05911):0.00254,98789:0.04504):0.00826,132422:0.05345):0.00749,((188898:0.04770,197123:0.05424):0.01675,115098:0.02183)M1_h03_1:0.04025)M3_e09_3:0.02907,49369:0.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