Mercurial > repos > gga > apollo_delete_organism

diff delete_organism.xml @ 5:0af4179e6758 draft

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planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 85194fa009ead2c34720faab61a4143fc29d17c2
author gga
date Fri, 31 Aug 2018 09:34:10 -0400
parents a5de2095bd01
children 1575f11ac6fc
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--- a/delete_organism.xml	Mon Mar 12 06:32:27 2018 -0400
+++ b/delete_organism.xml	Fri Aug 31 09:34:10 2018 -0400
@@ -16,6 +16,7 @@
         --gff "$gff_out"
         --fasta "$fasta_out"
         --json "$json_out"
+        "$__user_email__"
 
         &&
 
@@ -38,7 +39,9 @@
     <param name="ask_two" type="boolean" truevalue="yes" falsevalue="" label="Are you really, really SURE you want to do this?" help="There's NO coming back from this."/>
   </inputs>
   <outputs>
-    <data format="tabular" name="output" label="Process and Error Log"/>
+    <data format="tabular" name="output" label="Process and Error Log">
+        <discover_datasets pattern="(?P&lt;designation&gt;.+)\.txt" format="tabular" visible="true"/>
+    </data>
 
     <data format="gff3" name="gff_out" label="Annotations from Apollo" hidden="true"/>
     <data format="fasta" name="fasta_out" label="Sequence(s) from Apollo" hidden="true"/>