Mercurial > repos > gga > apollo_delete_organism

diff test-data/load_gff3/output.txt @ 13:6ea838bf1f2f draft

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"planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 7bf18c69becc57152efdadedf7ebd0bcfa382a15"
author gga
date Mon, 29 Jun 2020 09:15:25 -0400
parents
children
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/load_gff3/output.txt	Mon Jun 29 09:15:25 2020 -0400
@@ -0,0 +1,646 @@
+{
+  "Merlin_1_mRNA": {
+    "owner": "admin@local.host",
+    "parent_name": "Merlin_1_mRNA",
+    "uniquename": "d33cb6e8-0809-442f-84ff-015aff163846",
+    "type": {
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+        "name": "sequence"
+      },
+      "name": "mRNA"
+    },
+    "parent_type": {
+      "cv": {
+        "name": "sequence"
+      },
+      "name": "gene"
+    },
+    "date_creation": 1593424039041,
+    "sequence": "Merlin",
+    "children": [
+      {
+        "owner": "None",
+        "parent_name": "Merlin_1_mRNA-00001",
+        "uniquename": "d33cb6e8-0809-442f-84ff-015aff163846-CDS",
+        "type": {
+          "cv": {
+            "name": "sequence"
+          },
+          "name": "CDS"
+        },
+        "parent_type": {
+          "cv": {
+            "name": "sequence"
+          },
+          "name": "mRNA"
+        },
+        "date_creation": 1593424039071,
+        "sequence": "Merlin",
+        "parent_id": "d33cb6e8-0809-442f-84ff-015aff163846",
+        "name": "d33cb6e8-0809-442f-84ff-015aff163846-CDS",
+        "location": {
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+          "is_fmin_partial": true,
+          "id": 459,
+          "fmin": 1,
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+        },
+        "id": 458,
+        "properties": [],
+        "date_last_modified": 1593424039095
+      },
+      {
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+        "parent_name": "Merlin_1_mRNA-00001",
+        "uniquename": "0356ce47-8746-4557-9f45-2b08625ebc63",
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+        "sequence": "Merlin",
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+      {
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+        "uniquename": "46e2b6ce-5cf2-4472-b858-9535a374f535",
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+        "parent_id": "d5d0e6eb-458d-4402-b2ee-c19e4c1e0666",
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+    "properties": [],
+    "date_last_modified": 1593424039356
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+  "Merlin_3_mRNA": {
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+    "parent_name": "Merlin_3_mRNA",
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+    "type": {
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+      "name": "mRNA"
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+      "name": "gene"
+    },
+    "date_creation": 1593424039392,
+    "sequence": "Merlin",
+    "children": [
+      {
+        "owner": "None",
+        "parent_name": "Merlin_3_mRNA-00001",
+        "uniquename": "3fc60774-85c1-4cbd-aca3-1a1a74a2cbf3",
+        "type": {
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+        "sequence": "Merlin",
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+        "date_last_modified": 1593424039410
+      },
+      {
+        "owner": "None",
+        "parent_name": "Merlin_3_mRNA-00001",
+        "uniquename": "c1e84840-7b7e-4c45-b044-e6ffaa89cb5d-CDS",
+        "type": {
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+          "name": "CDS"
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+        "sequence": "Merlin",
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+    },
+    "id": 476,
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+    "type": {
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+    },
+    "date_creation": 1593424039555,
+    "sequence": "Merlin",
+    "children": [
+      {
+        "owner": "None",
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+        "uniquename": "4b3f4451-6feb-4a89-85ee-002c03679c4b-CDS",
+        "type": {
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+      {
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+    "id": 496,
+    "properties": [],
+    "date_last_modified": 1593424039596
+  },
+  "Merlin_5_mRNA": {
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+      "name": "gene"
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+    "sequence": "Merlin",
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+        "parent_name": "Merlin_5_mRNA-00001",
+        "uniquename": "19b80336-a138-4276-96e1-116a7787afe8-non_canonical_five_prime_splice_site-4363",
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+        "type": {
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+          "name": "non_canonical_three_prime_splice_site"
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+        "parent_type": {
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+      {
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+        "uniquename": "31a23617-42b1-4bf1-a65d-45eccdd17e8e",
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+        "sequence": "Merlin",
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+        "uniquename": "19b80336-a138-4276-96e1-116a7787afe8-CDS",
+        "type": {
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+  },
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+    "uniquename": "0e34cfa5-6f64-4111-9c2f-37655f6f1b92",
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+      "name": "gene"
+    },
+    "date_creation": 1593424039850,
+    "sequence": "Merlin",
+    "children": [
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+        "properties": [],
+        "date_last_modified": 1593424039867
+      }
+    ],
+    "parent_id": "f7843db6-26da-44f9-ae05-6bb92ca573f6",
+    "name": "Merlin_42_mRNA-00001",
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+  }
+}