Mercurial > repos > gga > apollo_export

comparison export.xml @ 5:950fb2bf116d draft

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planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 85194fa009ead2c34720faab61a4143fc29d17c2
author gga
date Fri, 31 Aug 2018 09:33:38 -0400
parents 5559e41721c3
children f45ad96c9e08
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4:5559e41721c3 5:950fb2bf116d
15 15
16 --gff "$gff_out" 16 --gff "$gff_out"
17 --fasta "$fasta_out" 17 --fasta "$fasta_out"
18 --json "$json_out" 18 --json "$json_out"
19 19
20 "$__user_email__"
21
20 ]]></command> 22 ]]></command>
21 <inputs> 23 <inputs>
22 <expand macro="cn_or_guess" /> 24 <expand macro="cn_or_guess" />
23 </inputs> 25 </inputs>
24 <outputs> 26 <outputs>
25 <data format="gff3" name="gff_out" label="Annotations from Apollo"/> 27 <data format="gff3" name="gff_out" label="Annotations from Apollo"/>
26 <data format="fasta" name="fasta_out" label="Sequence(s) from Apollo"/> 28 <data format="fasta" name="fasta_out" label="Sequence(s) from Apollo"/>
27 <data format="json" name="json_out" label="Metadata from Apollo"/> 29 <data format="json" name="json_out" label="Metadata from Apollo">
30 <discover_datasets pattern="(?P&lt;designation&gt;.+)\.txt" format="tabular" visible="true"/>
31 </data>
28 </outputs> 32 </outputs>
29 <tests> 33 <tests>
30 <test expect_failure="true"> 34 <test expect_failure="true">
31 <conditional name="org_source"> 35 <conditional name="org_source">
32 <param name="source_select" value="direct"/> 36 <param name="source_select" value="direct"/>