Mercurial > repos > gga > apollo_export

comparison test-data/dataset_1_files/galaxy.xml @ 10:c3b5bc8b4080 draft

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"planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 08015be1ee8a784e0619f961aaa724857debfd6f"
author gga
date Mon, 02 Dec 2019 05:43:20 -0500
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9:f45ad96c9e08 10:c3b5bc8b4080
1 <?xml version="1.0"?>
2 <root>
3 <metadata>
4 <gencode>1</gencode>
5 <genomes>
6 <genome path="/opt/galaxy-dist/database/files/002/188/dataset_2188862.dat">
7 <metadata>
8 <dataset id="7495a4247e72f5f1" hid="1"
9 size="171.6 KB"
10 edam_format="format_1929"
11 file_ext="fasta" />
12 <history id="d29e465b351a50c9"
13 user_email="anthony.bretaudeau@irisa.fr"
14 user_id="17"
15 display_name="Unnamed history"/>
16 <metadata
17 dbkey="?"
18 data_lines="2881"
19 sequences="1"
20 />
21 <tool
22 tool_id="upload1"
23 tool_version="1.1.6"
24 />
25 </metadata>
26 </genome>
27 </genomes>
28 <general>
29 <defaultLocation></defaultLocation>
30 <trackPadding>20</trackPadding>
31
32 <shareLink>true</shareLink>
33 <aboutDescription></aboutDescription>
34 <show_tracklist>true</show_tracklist>
35 <show_nav>true</show_nav>
36 <show_overview>true</show_overview>
37 <show_menu>true</show_menu>
38 <hideGenomeOptions>false</hideGenomeOptions>
39 </general>
40 <galaxyUrl>http://localhost</galaxyUrl>
41 </metadata>
42 <tracks>
43 <track cat="Default" format="gene_calls" visibility="default_off">
44 <files>
45 <trackFile path="/opt/galaxy-dist/database/files/002/188/dataset_2188863.dat" ext="gff3" label="merlin.gff">
46 <metadata>
47 <dataset id="b02ee2031011d9cf" hid="2"
48 size="110.3 KB"
49 edam_format="format_1975"
50 file_ext="gff3" />
51 <history id="d29e465b351a50c9"
52 user_email="anthony.bretaudeau@irisa.fr"
53 user_id="17"
54 display_name="Unnamed history"/>
55 <metadata
56 dbkey="?"
57 data_lines="1228"
58 comment_lines="2"
59 columns="9"
60 delimiter="__tc__"
61 attributes="4"
62 />
63 <tool
64 tool_id="upload1"
65 tool_version="1.1.6"
66 />
67 </metadata>
68 </trackFile>
69 </files>
70
71 <options>
72 <style>
73 <overridePlugins>False</overridePlugins>
74 <overrideDraggable>False</overrideDraggable>
75 <className>feature</className>
76 <description>note,description</description>
77 <label>product,name,id</label>
78 <height>10px</height>
79 <maxHeight>600</maxHeight>
80 </style>
81 <scaling>
82 <method>ignore</method>
83 <scheme>
84 <color>__auto__</color>
85 </scheme>
86 </scaling>
87 <menus>
88 </menus>
89 <custom_config>
90 </custom_config>
91
92 <gff>
93 <trackType>NeatHTMLFeatures/View/Track/NeatFeatures</trackType>
94 <index>false</index>
95 </gff>
96 </options>
97 </track>
98 </tracks>
99 <plugins
100 ComboTrackSelector=""
101 Bookmarks=""
102 GCContent=""
103 BlastView="True"
104 theme=""
105 />
106 </root>