Mercurial > repos > gga > apollo_feat_from_gff3

diff test-data/bad-model.gff3 @ 0:5aa3bc8d0253 draft

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planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit f745b23c84a615bf434d717c8c0e553a012f0268
author gga
date Mon, 11 Sep 2017 05:45:37 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/bad-model.gff3	Mon Sep 11 05:45:37 2017 -0400
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+##gff-version 3
+##sequence-region Maroon_JMcDermott 1 144762
+Maroon_JMcDermott	.	gene	14488	14805	.	+	.	Name=gene_26;date_creation=2016-02-17;owner=jmc_texas@tamu.edu;ID=707c88b7-36d1-44e3-93e6-d1d4f1219d57;date_last_modified=2016-02-17
+Maroon_JMcDermott	.	mRNA	14488	14805	.	+	.	Name=gene_26-00001;date_creation=2016-02-17;Parent=707c88b7-36d1-44e3-93e6-d1d4f1219d57;owner=jmc_texas@tamu.edu;ID=8760695d-b88c-41c0-857b-540e6db81fe8;date_last_modified=2016-02-17
+Maroon_JMcDermott	.	CDS	14707	14805	.	+	0	Name=94abf796-4c8d-45f4-916b-4d279616565e-CDS;Parent=8760695d-b88c-41c0-857b-540e6db81fe8;ID=94abf796-4c8d-45f4-916b-4d279616565e
+Maroon_JMcDermott	.	exon	14497	14805	.	+	.	Name=d2ebd8d0-6558-4674-a38f-346f88256340-exon;Parent=8760695d-b88c-41c0-857b-540e6db81fe8;ID=d2ebd8d0-6558-4674-a38f-346f88256340
+Maroon_JMcDermott	.	exon	14488	14491	.	+	.	Name=2e4119f9-3220-4502-8ddd-4821c872e0d6-exon;Parent=8760695d-b88c-41c0-857b-540e6db81fe8;ID=2e4119f9-3220-4502-8ddd-4821c872e0d6
+Maroon_JMcDermott	.	non_canonical_five_prime_splice_site	14494	14494	.	+	.	Name=8760695d-b88c-41c0-857b-540e6db81fe8-non_canonical_five_prime_splice_site-14493;Parent=8760695d-b88c-41c0-857b-540e6db81fe8;ID=8760695d-b88c-41c0-857b-540e6db81fe8-non_canonical_five_prime_splice_site-14493
+Maroon_JMcDermott	.	non_canonical_three_prime_splice_site	14497	14497	.	+	.	Name=8760695d-b88c-41c0-857b-540e6db81fe8-non_canonical_three_prive_splice_site-14496;Parent=8760695d-b88c-41c0-857b-540e6db81fe8;ID=8760695d-b88c-41c0-857b-540e6db81fe8-non_canonical_three_prive_splice_site-14496