Mercurial > repos > gga > apollo_fetch_jbrowse

comparison create_features_from_gff3.py @ 4:9968eec7430e draft

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planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 70fbb41d4c6b0a08a7bed4849a5ae7c865e1ab1e
author gga
date Mon, 12 Mar 2018 06:30:56 -0400
parents c6d7f19953a6
children 1a2976c6b161
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3:20c6db7856c6 4:9968eec7430e
2 import argparse 2 import argparse
3 import logging 3 import logging
4 import sys 4 import sys
5 import time 5 import time
6 6
7 from builtins import str 7 from BCBio import GFF
8 8
9 from BCBio import GFF 9 from six.moves.builtins import str
10 10
11 from webapollo import AssertUser, GuessOrg, OrgOrGuess, WAAuth, WebApolloInstance, featuresToFeatureSchema, retry 11 from webapollo import AssertUser, GuessOrg, OrgOrGuess, WAAuth, WebApolloInstance, featuresToFeatureSchema, retry
12 logging.basicConfig(level=logging.INFO) 12 logging.basicConfig(level=logging.INFO)
13 log = logging.getLogger(__name__) 13 log = logging.getLogger(__name__)
14 14