Mercurial > repos > gga > apollo_fetch_jbrowse

comparison fetch_organism_jbrowse.xml @ 17:d91f4bc313d3 draft default tip

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planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit 12282c16658b37858f49944796fd95515ef0fc0b
author gga
date Wed, 11 Jan 2023 11:48:24 +0000
parents dca2fb399ee6
children
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16:654af4ba76bc 17:d91f4bc313d3
2 <tool id="fetch_jbrowse" name="Retrieve JBrowse" version="@WRAPPER_VERSION@" profile="16.04"> 2 <tool id="fetch_jbrowse" name="Retrieve JBrowse" version="@WRAPPER_VERSION@" profile="16.04">
3 <description>for an organism, from Apollo</description> 3 <description>for an organism, from Apollo</description>
4 <macros> 4 <macros>
5 <import>macros.xml</import> 5 <import>macros.xml</import>
6 </macros> 6 </macros>
7 <expand macro="requirements"/> 7 <expand macro="requirements">
8 <requirement type="package" version="3.2.7">rsync</requirement>
9 </expand>
8 <code file="webapollo.py"/> 10 <code file="webapollo.py"/>
9 <command detect_errors="aggressive"><![CDATA[ 11 <command detect_errors="aggressive"><![CDATA[
10 mkdir -p '$jbrowse.files_path/' 12 mkdir -p '$jbrowse.files_path/'
11 13
12 && 14 &&