Mercurial > repos > gga > apollo_list_organism
view list_organisms.xml @ 7:8bcf0fb07f1e draft
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/apollo commit b9143221aee2cd09e1334ee56ff9651550b1797a
author | gga |
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date | Fri, 15 Mar 2019 06:05:35 -0400 |
parents | a3000d01c04c |
children | f26ac3b582e1 |
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<?xml version="1.0"?> <tool id="list_organism" name="List Organisms" version="3.1"> <description>in Apollo</description> <macros> <import>macros.xml</import> </macros> <expand macro="requirements"/> <command detect_errors="aggressive"><![CDATA[ python $__tool_directory__/list_organisms.py @ADMIN_AUTH@ $__user_email__ > $output]]></command> <inputs> </inputs> <outputs> <data format="json" name="output"> <discover_datasets pattern="(?P<designation>.+)\.txt" format="tabular" visible="true"/> </data> </outputs> <tests> <test expect_failure="true"> <expand macro="test_result" /> </test> </tests> <help><![CDATA[ **What it does** Lists organism in Apollo @REFERENCES@ ]]></help> <expand macro="citations"/> </tool>