Mercurial > repos > gga > chado_analysis_get_analyses

comparison analysis_get_analyses.xml @ 7:304b8f21bb97 draft

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planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit f5c5d81fc9781371e12b91c0d609b9201587cda5
author gga
date Fri, 23 Nov 2018 11:01:49 -0500
parents 693fd0ba9cf2
children 5812e9cddfa8
comparison
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6:8a87a22cf4ba 7:304b8f21bb97
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool id="analysis_get_analyses" name="Chado analysis get" version="@WRAPPER_VERSION@.0"> 2 <tool id="analysis_get_analyses" name="Chado analysis get" version="@WRAPPER_VERSION@.0">
3 <description></description> 3 <description></description>
4 <macros> 4 <macros>
5 <import>macros.xml</import> 5 <import>macros.xml</import>
6 </macros> 6 </macros>
7 <expand macro="requirements"/> 7 <expand macro="requirements"/>
8 <command detect_errors="aggressive"><![CDATA[ 8 <command detect_errors="aggressive"><![CDATA[
9 @AUTH@ 9 @AUTH@
10 10
11 chakin analysis get_analyses 11 chakin analysis get_analyses
12 12
13 #if $analysis_id: 13 #if $analysis_id:
38 --description '$description' 38 --description '$description'
39 #end if 39 #end if
40 40
41 | jq -S . > $results 41 | jq -S . > $results
42 ]]></command> 42 ]]></command>
43 <inputs> 43 <inputs>
44 <!-- arguments --> 44 <!-- options -->
45 <param name="analysis_id" label="Analysis Id" argument="--analysis_id" type="integer" help="analysis_id filter" optional="True" />
46 <param name="name" label="Name" argument="--name" type="text" help="analysis name filter" optional="True" />
47 <param name="program" label="Program" argument="--program" type="text" help="analysis program filter" optional="True" />
48 <param name="programversion" label="Programversion" argument="--programversion" type="text" help="analysis programversion filter" optional="True" />
49 <param name="algorithm" label="Algorithm" argument="--algorithm" type="text" help="analysis algorithm filter" optional="True" />
50 <param name="sourcename" label="Sourcename" argument="--sourcename" type="text" help="analysis sourcename filter" optional="True" />
51 <param name="sourceversion" label="Sourceversion" argument="--sourceversion" type="text" help="analysis sourceversion filter" optional="True" />
52 <param name="sourceuri" label="Sourceuri" argument="--sourceuri" type="text" help="analysis sourceuri filter" optional="True" />
53 <param name="description" label="Description" argument="--description" type="text" help="analysis description" optional="True" />
45 54
46 <!-- options --> 55 </inputs>
47 <param name="analysis_id" label="Analysis Id" argument="analysis_id" type="integer" help="analysis_id filter" optional="True" /> 56 <outputs>
48 <param name="name" label="Name" argument="name" type="text" help="analysis name filter" optional="True" /> 57 <data format="json" name="results"/>
49 <param name="program" label="Program" argument="program" type="text" help="analysis program filter" optional="True" /> 58 </outputs>
50 <param name="programversion" label="Programversion" argument="programversion" type="text" help="analysis programversion filter" optional="True" /> 59 <help>
51 <param name="algorithm" label="Algorithm" argument="algorithm" type="text" help="analysis algorithm filter" optional="True" />
52 <param name="sourcename" label="Sourcename" argument="sourcename" type="text" help="analysis sourcename filter" optional="True" />
53 <param name="sourceversion" label="Sourceversion" argument="sourceversion" type="text" help="analysis sourceversion filter" optional="True" />
54 <param name="sourceuri" label="Sourceuri" argument="sourceuri" type="text" help="analysis sourceuri filter" optional="True" />
55 <param name="description" label="Description" argument="description" type="text" help="analysis description" optional="True" />
56
57 </inputs>
58 <outputs>
59 <data format="json" name="results"/>
60 </outputs>
61 <help>
62 Get all or some analyses 60 Get all or some analyses
63 61
64 @HELP@ 62 @HELP@
65 </help> 63 </help>
66 </tool> 64 </tool>