Mercurial > repos > gga > chado_analysis_get_analyses

comparison analysis_get_analyses.xml @ 10:dde12105d2d1 draft

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planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit 0b135f1ea2623ea68e41ac88e13d99e6b4ad8bea
author gga
date Mon, 08 Jul 2019 05:33:16 -0400
parents 5812e9cddfa8
children dc85293ad585
comparison
equal deleted inserted replaced
9:5812e9cddfa8 10:dde12105d2d1
4 <macros> 4 <macros>
5 <import>macros.xml</import> 5 <import>macros.xml</import>
6 </macros> 6 </macros>
7 <expand macro="requirements"/> 7 <expand macro="requirements"/>
8 <command detect_errors="aggressive"><![CDATA[ 8 <command detect_errors="aggressive"><![CDATA[
9 @AUTH@ 9 @START_PSQL@ &&
10 10
11 chakin analysis get_analyses 11 chakin analysis get_analyses
12 12
13 #if $analysis_id: 13 #if $analysis_id:
14 --analysis_id '$analysis_id' 14 --analysis_id '$analysis_id'
37 #if $description: 37 #if $description:
38 --description '$description' 38 --description '$description'
39 #end if 39 #end if
40 40
41 | jq -S . > '$results' 41 | jq -S . > '$results'
42
43 && @STOP_PSQL@
42 ]]></command> 44 ]]></command>
43 <inputs> 45 <inputs>
44 <!-- options --> 46 <expand macro="psql_target"/>
45 <param name="analysis_id" label="Analysis Id" argument="--analysis_id" type="integer" help="analysis_id filter" optional="True" /> 47 <!-- options -->
46 <param name="name" label="Name" argument="--name" type="text" help="analysis name filter" optional="True" /> 48 <param name="analysis_id" label="Analysis Id" argument="--analysis_id" type="integer" help="analysis_id filter" optional="True" />
47 <param name="program" label="Program" argument="--program" type="text" help="analysis program filter" optional="True" /> 49 <param name="name" label="Name" argument="--name" type="text" help="analysis name filter" optional="True" />
48 <param name="programversion" label="Programversion" argument="--programversion" type="text" help="analysis programversion filter" optional="True" /> 50 <param name="program" label="Program" argument="--program" type="text" help="analysis program filter" optional="True" />
49 <param name="algorithm" label="Algorithm" argument="--algorithm" type="text" help="analysis algorithm filter" optional="True" /> 51 <param name="programversion" label="Programversion" argument="--programversion" type="text" help="analysis programversion filter" optional="True" />
50 <param name="sourcename" label="Sourcename" argument="--sourcename" type="text" help="analysis sourcename filter" optional="True" /> 52 <param name="algorithm" label="Algorithm" argument="--algorithm" type="text" help="analysis algorithm filter" optional="True" />
51 <param name="sourceversion" label="Sourceversion" argument="--sourceversion" type="text" help="analysis sourceversion filter" optional="True" /> 53 <param name="sourcename" label="Sourcename" argument="--sourcename" type="text" help="analysis sourcename filter" optional="True" />
52 <param name="sourceuri" label="Sourceuri" argument="--sourceuri" type="text" help="analysis sourceuri filter" optional="True" /> 54 <param name="sourceversion" label="Sourceversion" argument="--sourceversion" type="text" help="analysis sourceversion filter" optional="True" />
53 <param name="description" label="Description" argument="--description" type="text" help="analysis description" optional="True" /> 55 <param name="sourceuri" label="Sourceuri" argument="--sourceuri" type="text" help="analysis sourceuri filter" optional="True" />
56 <param name="description" label="Description" argument="--description" type="text" help="analysis description" optional="True" />
54 57
55 </inputs> 58 </inputs>
56 <outputs> 59 <outputs>
57 <data format="json" name="results"/> 60 <data format="json" name="results"/>
58 </outputs> 61 </outputs>