Mercurial > repos > gga > chado_export_export_fasta
view export_export_fasta.xml @ 18:5f0a0e447bd2 draft
"planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit 170209d14cabe6ce8ab7b9f06df7fbf36af2ba43"
author | gga |
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date | Tue, 04 May 2021 12:48:45 +0000 |
parents | 20e02d166534 |
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<?xml version="1.0"?> <tool id="export_export_fasta" name="Chado export fasta" version="@WRAPPER_VERSION@"> <description></description> <macros> <import>macros.xml</import> </macros> <expand macro="requirements"/> <code file="chado.py"/> <command detect_errors="aggressive"><![CDATA[ @START_PSQL@ && chakin export export_fasta '$organism' > '$results' @STOP_PSQL@ ]]></command> <inputs> <expand macro="psql_target"/> <!-- arguments --> <param argument="--organism" type="select" dynamic_options="list_organisms()" label="Organism" /> <expand macro="wait_for"/> </inputs> <outputs> <data format="fasta" name="results"/> </outputs> <help> Export reference sequences as fasta. @HELP@ </help> </tool>