Mercurial > repos > gga > chado_export_export_fasta
view export_export_fasta.xml @ 10:c4cc24593d0b draft
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit 0b135f1ea2623ea68e41ac88e13d99e6b4ad8bea
author | gga |
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date | Mon, 08 Jul 2019 05:32:59 -0400 |
parents | 65b10109e3fe |
children | 68353384ec7f |
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<?xml version="1.0"?> <tool id="export_export_fasta" name="Chado export fasta" version="@WRAPPER_VERSION@.0"> <description></description> <macros> <import>macros.xml</import> </macros> <expand macro="requirements"/> <code file="chado.py"/> <command detect_errors="aggressive"><![CDATA[ @START_PSQL@ && chakin export export_fasta '$organism' > '$results' && @STOP_PSQL@ ]]></command> <inputs> <expand macro="psql_target"/> <!-- arguments --> <param argument="--organism" type="select" dynamic_options="list_organisms()" label="Organism" /> <expand macro="wait_for"/> </inputs> <outputs> <data format="fasta" name="results"/> </outputs> <help> Export reference sequences as fasta. @HELP@ </help> </tool>