Mercurial > repos > gga > chado_expression_delete_all_biomaterials

diff expression_delete_all_biomaterials.xml @ 5:3a3791f72693 draft

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planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit 0b135f1ea2623ea68e41ac88e13d99e6b4ad8bea
author gga
date Mon, 08 Jul 2019 05:36:49 -0400
parents c3a38dd6e7aa
children 596d9834ac30
line wrap: on
line diff
--- a/expression_delete_all_biomaterials.xml	Tue Mar 05 05:15:31 2019 -0500
+++ b/expression_delete_all_biomaterials.xml	Mon Jul 08 05:36:49 2019 -0400
@@ -6,15 +6,18 @@
     </macros>
     <expand macro="requirements"/>
     <command detect_errors="aggressive"><![CDATA[
-@AUTH@
+@START_PSQL@ &&
 
 chakin expression delete_all_biomaterials
 
 $confirm
 
  > '$results'
+
+ && @ZIP_PSQL@
     ]]></command>
     <inputs>
+        <expand macro="psql_target"/>
         <!-- options -->
         <param name="confirm" label="Confirm" argument="confirm" type="boolean" truevalue="--confirm" falsevalue="" help="Confirm that you really do want to delete ALL of the biomaterials." />
 
@@ -22,6 +25,9 @@
     </inputs>
     <outputs>
         <data format="txt" name="results"/>
+<data format="postgresql" name="outfile" from_work_dir="postgresql_out.tar.bz2" label="${tool.name} on ${on_string}">
+  <filter>psql_target['method'] == "pgtools"</filter>
+</data>
     </outputs>
     <help>
 Delete all biomaterials