Mercurial > repos > gga > chado_feature_delete_features
diff feature_delete_features.xml @ 10:52fe2a335964 draft
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit 0b135f1ea2623ea68e41ac88e13d99e6b4ad8bea
| author | gga |
|---|---|
| date | Mon, 08 Jul 2019 05:33:59 -0400 |
| parents | 4c973d69c8e6 |
| children | 926dbc8a33a1 |
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--- a/feature_delete_features.xml Tue Mar 05 05:13:53 2019 -0500 +++ b/feature_delete_features.xml Mon Jul 08 05:33:59 2019 -0400 @@ -7,7 +7,7 @@ <expand macro="requirements"/> <code file="chado.py"/> <command detect_errors="aggressive"><![CDATA[ -@AUTH@ +@START_PSQL@ && chakin feature delete_features @@ -25,17 +25,22 @@ #end if | jq -S . > '$results' + +&& @ZIP_PSQL@ ]]></command> <inputs> - <!-- options --> - <param argument="--organism" type="select" dynamic_options="list_organisms()" label="Organism" /> - <param argument="--analysis_id" type="select" dynamic_options="list_analyses()" label="Analysis" /> - <param name="name" label="Name" argument="--name" type="text" help="name filter" /> - <param name="uniquename" label="Uniquename" argument="--uniquename" type="text" help="uniquename filter" /> - + <expand macro="psql_target"/> + <!-- options --> + <param argument="--organism" type="select" dynamic_options="list_organisms()" label="Organism" /> + <param argument="--analysis_id" type="select" dynamic_options="list_analyses()" label="Analysis" /> + <param name="name" label="Name" argument="--name" type="text" help="name filter" /> + <param name="uniquename" label="Uniquename" argument="--uniquename" type="text" help="uniquename filter" /> </inputs> <outputs> <data format="json" name="results"/> + <data format="postgresql" name="outfile" from_work_dir="postgresql_out.tar.bz2" label="${tool.name} on ${on_string}"> + <filter>psql_target['method'] == "pgtools"</filter> + </data> </outputs> <help> Get all or some features