--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/analysis_load_blast.xml	Mon Sep 11 05:50:16 2017 -0400
@@ -0,0 +1,97 @@
+<?xml version="1.0"?>
+<tool id="analysis_load_blast" profile="16.04" name="Load Blast results" version="@WRAPPER_VERSION@.0">
+    <description>into Tripal</description>
+    <macros>
+        <import>macros.xml</import>
+    </macros>
+    <expand macro="requirements"/>
+    <code file="tripal.py"/>
+    <expand macro="stdio"/>
+    <command><![CDATA[
+        tmp_dir=`mktemp -d -p "@DATA_DIR@"` && chmod a+rx "\${tmp_dir}"
+
+        &&
+
+        cp '${blast_output}' "\${tmp_dir}/blast_input.xml"
+
+        &&
+
+        @AUTH@
+
+        tripaille analysis load_blast
+
+            --is_concat
+
+            --blastdb_id '${blastdb}'
+
+            --blast_parameters '${params}'
+
+            @MATCHING@
+
+            @ANALYSIS@
+
+            "\${tmp_dir}/blast_input.xml"
+
+        &&
+
+        echo "Data loaded" > $results
+    ]]></command>
+    <inputs>
+        <param name="blast_output"
+               type="data"
+               format="xml"
+               label="Blast blast_output" />
+
+        <param argument="--blastdb"
+               type="select"
+               dynamic_options="list_blastdbs()"
+               label="Blast databank used" />
+
+        <param name="params"
+               type="text"
+               label="Blast parameters used to produce the results" />
+
+        <expand macro="matching"/>
+
+        <expand macro="analysis" />
+    </inputs>
+    <outputs>
+        <data format="txt" name="results" label="Load Blast results into Tripal" />
+    </outputs>
+    <tests>
+        <test expect_failure="true" expect_exit_code="1">
+            <param name="blast_output" value="blast.xml" />
+            <param name="blastdb" value="genbank:protein" />
+            <param name="params" value="-e 0.001" />
+            <param name="query_type" value="mRNA" />
+            <param name="query_uniquename" value="true" />
+            <section name="analysis">
+                <param name="name" value="Some analysis" />
+                <param name="program" value="blastp" />
+                <param name="program_version" value="2.5.0" />
+                <param name="algorithm" value="blast" />
+                <param name="source" value="NCBI" />
+                <param name="source_version" value="1.0" />
+                <param name="source_uri" value="http://ncbi.com/somewhere" />
+                <param name="description" value="My cool new test analysis" />
+                <param name="date" value="2016-12-12" />
+            </section>
+
+            <expand macro="test_result" />
+        </test>
+    </tests>
+    <help><![CDATA[
+        @HELP_OVERVIEW@
+
+        **Load Blast results**
+
+        With this tool, you can load Blast results into the Tripal/Chado database.
+
+        A corresponding analysis will be created, keep in mind that you cannot add multiple analysis with the same program, program version and source.
+
+        The `tripal_analysis_blast <http://github.com/tripal/tripal_analysis_blast>`_ module must be installed and configured on the Tripal instance.
+
+        @HELP@
+    ]]></help>
+    <expand macro="citation"/>
+</tool>