Mercurial > repos > gga > tripal_entity_publish

diff entity_publish.xml @ 0:fd775ed5c129 draft

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planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 869e5fd8535deca8325777efcd31c70a514b582a
author gga
date Mon, 25 Feb 2019 06:31:21 -0500
parents
children cf07e70c1502
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/entity_publish.xml	Mon Feb 25 06:31:21 2019 -0500
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+<?xml version="1.0"?>
+<tool id="entity_publish" name="Publish entities" version="@WRAPPER_VERSION@.0">
+ <description>in Tripal</description>
+    <macros>
+        <import>macros.xml</import>
+    </macros>
+    <expand macro="requirements"/>
+    <command detect_errors="aggressive"><![CDATA[
+tripaille entity publish
+
+#for $rep in $repeat_types:
+  --types '$rep.types'
+#end for
+
+| jq -S . > $results
+]]></command>
+    <inputs>
+        <!-- arguments -->
+
+        <!-- options -->
+        <repeat name="repeat_types" title="types">
+            <param name="types" label="Types" argument="types" type="text" help="List of entity types to be published (e.g. Gene mRNA, default: all)" />
+        </repeat>
+
+    </inputs>
+    <outputs>
+        <data format="json" name="results"/>
+    </outputs>
+    <help>
+Publish entities (Tripal 3 only)
+
+@HELP@
+    </help>
+</tool>