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comparison codon_usage.xml @ 32:02503b9c8c39 draft

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author gianmarco_piccinno
date Wed, 12 Dec 2018 08:55:42 -0500
parents 3cb2af2435d3
children 1a9b703d6e17
comparison
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31:3cb2af2435d3 32:02503b9c8c39
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool name="Codon Usage" id="codon_usage" version="0.2.0"> 2 <tool name="Codon Usage" id="codon_usage" version="0.2.1">
3 <description>for each sequence in a file</description> 3 <description>for each sequence in a file</description>
4 <requirements> 4 <requirements>
5 <requirement type="package" version="2.7.15">python</requirement> 5 <requirement type="package" version="3.6.0">python</requirement>
6 <requirement type="package" version="1.72">biopython</requirement> 6 <requirement type="package" version="1.72">biopython</requirement>
7 <requirement type="package" version="0.23.4">pandas</requirement> 7 <requirement type="package" version="0.23.4">pandas</requirement>
8 <requirement type="package" version="1.15.3">numpy</requirement> 8 <requirement type="package" version="1.15.3">numpy</requirement>
9 </requirements> 9 </requirements>
10 10
11 <command> 11 <command>
12 <![CDATA[ 12 <![CDATA[
13 python '$__tool_directory__/codon_usage.py' -i $input -t $input_type -o $output -c $codon_table 13 python '$__tool_directory__/codon_usage.py' -i $input -t $input_type -o $output -c $codon_table
14 ]]> 14 ]]>
15 </command> 15 </command>