# HG changeset patch # User glogobyte # Date 1634743009 0 # Node ID 6f0fa933b3ed1be39c17695e4254a496ee7242ce # Parent 40c50594116ca068e9932697463c73b1c2ba02a2 Uploaded diff -r 40c50594116c -r 6f0fa933b3ed armdb_mirbase.py --- a/armdb_mirbase.py Wed Oct 20 14:45:20 2021 +0000 +++ b/armdb_mirbase.py Wed Oct 20 15:16:49 2021 +0000 @@ -5,17 +5,15 @@ from multiprocessing import Process, Queue import itertools - - #---------------------------------Arguments------------------------------------------ subprocess.call(['mkdir', 'out']) parser = argparse.ArgumentParser() -parser.add_argument("-pos", "--positions", help="", action="store") +parser.add_argument("-pos", "--positions", help="number of additional nucleotides", action="store") parser.add_argument("-tool_dir", "--tool_directory", help="tool directory path", action="store") -parser.add_argument("-gen", "--genome", help="tool directory path", action="store") -parser.add_argument("-gff3", "--gff", help="",action="store") +parser.add_argument("-gen", "--genome", help="genome version", action="store") +parser.add_argument("-gff3", "--gff", help="gff file",action="store") args = parser.parse_args() #-----------------------Download and read of the gff3 file---------------------------------