Mercurial > repos > glogobyte > isoread

comparison mirbase.py @ 32:5d232330e81f draft

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Uploaded
author glogobyte
date Wed, 20 Oct 2021 16:40:17 +0000
parents 0e7bd3f72c2c
children
comparison
equal deleted inserted replaced
31:23a88a3ec37d 32:5d232330e81f
212 control_group=list(con_list) 212 control_group=list(con_list)
213 treated_group=list(tre_list) 213 treated_group=list(tre_list)
214 214
215 # Filters low count mirnas (otpional) 215 # Filters low count mirnas (otpional)
216 if int(args.per)!=-1: 216 if int(args.per)!=-1:
217 if int(args.per)>0 and float(args.per)<=100 and int(args.count)>0: 217 if int(args.per)>0 and int(args.per)<=100 and int(args.count)>0:
218 218
219 fil_con_group=manager.list() 219 fil_con_group=manager.list()
220 fil_tre_group=manager.list() 220 fil_tre_group=manager.list()
221 221
222 ps_low_counts = Process(target=filter_low_counts,args=(control_group,treated_group,fil_con_group,fil_tre_group,args.per,args.count)) 222 ps_low_counts = Process(target=filter_low_counts,args=(control_group,treated_group,fil_con_group,fil_tre_group,args.per,args.count))
389 n_treated_group=list(n_tre_list) 389 n_treated_group=list(n_tre_list)
390 390
391 391
392 # Filters low count mirnas (otpional) 392 # Filters low count mirnas (otpional)
393 if int(args.per)!=-1: 393 if int(args.per)!=-1:
394 if int(args.per)>0 and float(args.per)<=100 and int(args.count)>0: 394 if int(args.per)>0 and int(args.per)<=100 and int(args.count)>0:
395 395
396 n_fil_con_group=manager.list() 396 n_fil_con_group=manager.list()
397 n_fil_tre_group=manager.list() 397 n_fil_tre_group=manager.list()
398 398
399 ps_low_counts = Process(target=filter_low_counts,args=(n_control_group,n_treated_group,n_fil_con_group,n_fil_tre_group,args.per,args.count)) 399 ps_low_counts = Process(target=filter_low_counts,args=(n_control_group,n_treated_group,n_fil_con_group,n_fil_tre_group,args.per,args.count))