Mercurial > repos > goeckslab > image_learner

annotate html_structure.py @ 13:1a9c42974a5a draft default tip

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planemo upload for repository https://github.com/goeckslab/gleam.git commit 9f96da4ea7ab3b572af86698ff51b870125cd674
author goeckslab
date Fri, 21 Nov 2025 17:35:00 +0000
parents bcfa2e234a80
children
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bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
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1 import base64
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
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2 import json
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3 from typing import Any, Dict, Optional
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4
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5 from constants import METRIC_DISPLAY_NAMES
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6 from utils import detect_output_type, extract_metrics_from_json
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7
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8
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9 def generate_table_row(cells, styles):
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10 """Helper function to generate an HTML table row."""
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11 return (
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12 "<tr>"
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13 + "".join(f"<td style='{styles}'>{cell}</td>" for cell in cells)
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14 + "</tr>"
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15 )
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16
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17
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18 def format_config_table_html(
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19 config: dict,
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20 split_info: Optional[str] = None,
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21 training_progress: dict = None,
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22 output_type: Optional[str] = None,
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23 ) -> str:
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24 display_keys = [
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25 "task_type",
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26 "model_name",
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27 "epochs",
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28 "batch_size",
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29 "fine_tune",
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30 "use_pretrained",
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31 "learning_rate",
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32 "random_seed",
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33 "early_stop",
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34 "threshold",
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35 ]
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36
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37 rows = []
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38
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39 for key in display_keys:
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40 val = config.get(key, None)
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41 if key == "threshold":
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42 if output_type != "binary":
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43 continue
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44 val = val if val is not None else 0.5
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45 val_str = f"{val:.2f}"
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46 if val == 0.5:
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47 val_str += " (default)"
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48 else:
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49 if key == "task_type":
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50 val_str = val.title() if isinstance(val, str) else "N/A"
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51 elif key == "batch_size":
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52 if val is not None:
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53 val_str = int(val)
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54 else:
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55 val = "auto"
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56 val_str = "auto"
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57 resolved_val = None
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58 if val is None or val == "auto":
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59 if training_progress:
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60 resolved_val = training_progress.get("batch_size")
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61 val = (
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62 "Auto-selected batch size by Ludwig:<br>"
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63 f"<span style='font-size: 0.85em;'>"
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64 f"{resolved_val if resolved_val else val}</span><br>"
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65 "<span style='font-size: 0.85em;'>"
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66 "Based on model architecture and training setup "
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67 "(e.g., fine-tuning).<br>"
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68 "See <a href='https://ludwig.ai/latest/configuration/trainer/"
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69 "#trainer-parameters' target='_blank'>"
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70 "Ludwig Trainer Parameters</a> for details."
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71 "</span>"
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72 )
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73 else:
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74 val = (
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75 "Auto-selected by Ludwig<br>"
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76 "<span style='font-size: 0.85em;'>"
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77 "Automatically tuned based on architecture and dataset.<br>"
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78 "See <a href='https://ludwig.ai/latest/configuration/trainer/"
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79 "#trainer-parameters' target='_blank'>"
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80 "Ludwig Trainer Parameters</a> for details."
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81 "</span>"
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82 )
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83 elif key == "learning_rate":
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84 if val is not None and val != "auto":
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85 val_str = f"{val:.6f}"
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86 else:
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87 if training_progress:
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88 resolved_val = training_progress.get("learning_rate")
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89 val_str = (
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90 "Auto-selected learning rate by Ludwig:<br>"
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91 f"<span style='font-size: 0.85em;'>"
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92 f"{resolved_val if resolved_val else 'auto'}</span><br>"
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93 "<span style='font-size: 0.85em;'>"
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94 "Based on model architecture and training setup "
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95 "(e.g., fine-tuning).<br>"
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96 "</span>"
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97 )
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98 else:
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99 val_str = (
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100 "Auto-selected by Ludwig<br>"
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101 "<span style='font-size: 0.85em;'>"
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102 "Automatically tuned based on architecture and dataset.<br>"
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103 "See <a href='https://ludwig.ai/latest/configuration/trainer/"
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104 "#trainer-parameters' target='_blank'>"
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105 "Ludwig Trainer Parameters</a> for details."
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106 "</span>"
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107 )
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108 elif key == "epochs":
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109 if val is None:
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110 val_str = "N/A"
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111 else:
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112 if (
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113 training_progress
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114 and "epoch" in training_progress
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115 and val > training_progress["epoch"]
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116 ):
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117 val_str = (
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118 f"Because of early stopping: the training "
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119 f"stopped at epoch {training_progress['epoch']}"
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120 )
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121 else:
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122 val_str = val
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123 else:
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124 val_str = val if val is not None else "N/A"
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125 if val_str == "N/A" and key not in ["task_type"]:
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126 continue
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127 rows.append(
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128 f"<tr>"
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129 f"<td style='padding: 6px 12px; border: 1px solid #ccc; text-align: left; "
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130 f"white-space: normal; word-break: break-word; overflow-wrap: anywhere;'>"
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131 f"{key.replace('_', ' ').title()}</td>"
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132 f"<td style='padding: 6px 12px; border: 1px solid #ccc; text-align: center; "
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133 f"white-space: normal; word-break: break-word; overflow-wrap: anywhere;'>"
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134 f"{val_str}</td>"
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135 f"</tr>"
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136 )
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137
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138 aug_cfg = config.get("augmentation")
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139 if aug_cfg:
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140 types = [str(a.get("type", "")) for a in aug_cfg]
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141 aug_val = ", ".join(types)
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142 rows.append(
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143 f"<tr><td style='padding: 6px 12px; border: 1px solid #ccc; text-align: left; "
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144 f"white-space: normal; word-break: break-word; overflow-wrap: anywhere;'>Augmentation</td>"
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145 f"<td style='padding: 6px 12px; border: 1px solid #ccc; text-align: center; "
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146 f"white-space: normal; word-break: break-word; overflow-wrap: anywhere;'>{aug_val}</td></tr>"
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147 )
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148
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149 if split_info:
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150 rows.append(
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151 f"<tr><td style='padding: 6px 12px; border: 1px solid #ccc; text-align: left; "
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152 f"white-space: normal; word-break: break-word; overflow-wrap: anywhere;'>Data Split</td>"
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153 f"<td style='padding: 6px 12px; border: 1px solid #ccc; text-align: center; "
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154 f"white-space: normal; word-break: break-word; overflow-wrap: anywhere;'>{split_info}</td></tr>"
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155 )
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156
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157 html = f"""
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158 <h2 style="text-align: center;">Model and Training Summary</h2>
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
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159 <div style="display: flex; justify-content: center;">
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160 <table style="border-collapse: collapse; width: 100%; table-layout: fixed;">
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diff changeset
161 <thead><tr>
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162 <th style="padding: 10px; border: 1px solid #ccc; text-align: left; white-space: nowrap; overflow: hidden; text-overflow: ellipsis;">Parameter</th>
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163 <th style="padding: 10px; border: 1px solid #ccc; text-align: center; white-space: nowrap; overflow: hidden; text-overflow: ellipsis;">Value</th>
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164 </tr></thead>
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165 <tbody>
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166 {"".join(rows)}
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167 </tbody>
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168 </table>
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169 </div><br>
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170 <p style="text-align: center; font-size: 0.9em;">
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171 Model trained using <a href="https://ludwig.ai/" target="_blank" rel="noopener noreferrer">Ludwig</a>.
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172 <a href="https://ludwig.ai/latest/configuration/" target="_blank" rel="noopener noreferrer">
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173 Ludwig documentation provides detailed information about default model and training parameters
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174 </a>
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175 </p><hr>
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176 """
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177 return html
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178
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179
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180 def get_html_template():
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181 """
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182 Returns the opening HTML, <head> (with CSS/JS), and opens <body> + .container.
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183 Includes:
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184 - Base styling for layout and tables
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185 - Sortable table headers with 3-state arrows (none ⇅, asc ↑, desc ↓)
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186 - A scroll helper class (.scroll-rows-30) that approximates ~30 visible rows
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
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187 - A guarded script so initializing runs only once even if injected twice
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188 """
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189 return """
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190 <!DOCTYPE html>
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191 <html>
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192 <head>
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193 <meta charset="UTF-8">
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194 <title>Galaxy-Ludwig Report</title>
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195 <style>
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196 body {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
197 font-family: Arial, sans-serif;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
198 margin: 0;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
199 padding: 20px;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
200 background-color: #f4f4f4;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
201 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
202 .container {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
203 max-width: 1200px;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
204 margin: auto;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
205 background: white;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
206 padding: 20px;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
207 box-shadow: 0 0 10px rgba(0, 0, 0, 0.1);
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
208 overflow-x: auto;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
209 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
210 h1 {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
211 text-align: center;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
212 color: #333;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
213 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
214 h2 {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
215 border-bottom: 2px solid #4CAF50;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
216 color: #4CAF50;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
217 padding-bottom: 5px;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
218 margin-top: 28px;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
219 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
220
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
221 /* baseline table setup */
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
222 table {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
223 border-collapse: collapse;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
224 margin: 20px 0;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
225 width: 100%;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
226 table-layout: fixed;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
227 background: #fff;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
228 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
229 table, th, td {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
230 border: 1px solid #ddd;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
231 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
232 th, td {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
233 padding: 10px;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
234 text-align: center;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
235 vertical-align: middle;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
236 word-break: break-word;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
237 white-space: normal;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
238 overflow-wrap: anywhere;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
239 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
240 th {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
241 background-color: #4CAF50;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
242 color: white;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
243 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
244
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
245 .plot {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
246 text-align: center;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
247 margin: 20px 0;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
248 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
249 .plot img {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
250 max-width: 100%;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
251 height: auto;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
252 border: 1px solid #ddd;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
253 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
254
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
255 /* -------------------
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
256 sortable columns (3-state: none ⇅, asc ↑, desc ↓)
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
257 ------------------- */
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
258 table.performance-summary th.sortable {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
259 cursor: pointer;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
260 position: relative;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
261 user-select: none;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
262 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
263 /* default icon space */
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
264 table.performance-summary th.sortable::after {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
265 content: '⇅';
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
266 position: absolute;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
267 right: 12px;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
268 top: 50%;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
269 transform: translateY(-50%);
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
270 font-size: 0.8em;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
271 color: #eaf5ea; /* light on green */
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
272 text-shadow: 0 0 1px rgba(0,0,0,0.15);
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
273 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
274 /* three states override the default */
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
275 table.performance-summary th.sortable.sorted-none::after { content: '⇅'; color: #eaf5ea; }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
276 table.performance-summary th.sortable.sorted-asc::after { content: '↑'; color: #ffffff; }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
277 table.performance-summary th.sortable.sorted-desc::after { content: '↓'; color: #ffffff; }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
278
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
279 /* show ~30 rows with a scrollbar (tweak if you want) */
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
280 .scroll-rows-30 {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
281 max-height: 900px; /* ~30 rows depending on row height */
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
282 overflow-y: auto; /* vertical scrollbar ("sidebar") */
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
283 overflow-x: auto;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
284 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
285
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
286 /* Tabs + Help button (used by build_tabbed_html) */
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
287 .tabs {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
288 display: flex;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
289 align-items: center;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
290 border-bottom: 2px solid #ccc;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
291 margin-bottom: 1rem;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
292 gap: 6px;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
293 flex-wrap: wrap;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
294 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
295 .tab {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
296 padding: 10px 20px;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
297 cursor: pointer;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
298 border: 1px solid #ccc;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
299 border-bottom: none;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
300 background: #f9f9f9;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
301 margin-right: 5px;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
302 border-top-left-radius: 8px;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
303 border-top-right-radius: 8px;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
304 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
305 .tab.active {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
306 background: white;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
307 font-weight: bold;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
308 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
309 .help-btn {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
310 margin-left: auto;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
311 padding: 6px 12px;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
312 font-size: 0.9rem;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
313 border: 1px solid #4CAF50;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
314 border-radius: 4px;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
315 background: #4CAF50;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
316 color: white;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
317 cursor: pointer;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
318 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
319 .tab-content {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
320 display: none;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
321 padding: 20px;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
322 border: 1px solid #ccc;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
323 border-top: none;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
324 background: #fff;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
325 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
326 .tab-content.active {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
327 display: block;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
328 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
329
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
330 /* Modal (used by get_metrics_help_modal) */
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
331 .modal {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
332 display: none;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
333 position: fixed;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
334 z-index: 9999;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
335 left: 0; top: 0;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
336 width: 100%; height: 100%;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
337 overflow: auto;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
338 background-color: rgba(0,0,0,0.4);
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
339 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
340 .modal-content {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
341 background-color: #fefefe;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
342 margin: 8% auto;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
343 padding: 20px;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
344 border: 1px solid #888;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
345 width: 90%;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
346 max-width: 900px;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
347 border-radius: 8px;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
348 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
349 .modal .close {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
350 color: #777;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
351 float: right;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
352 font-size: 28px;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
353 font-weight: bold;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
354 line-height: 1;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
355 margin-left: 8px;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
356 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
357 .modal .close:hover,
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
358 .modal .close:focus {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
359 color: black;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
360 text-decoration: none;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
361 cursor: pointer;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
362 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
363 .metrics-guide h3 { margin-top: 20px; }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
364 .metrics-guide p { margin: 6px 0; }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
365 .metrics-guide ul { margin: 10px 0; padding-left: 20px; }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
366 </style>
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
367
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
368 <script>
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
369 // Guard to avoid double-initialization if this block is included twice
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
370 (function(){
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
371 if (window.__perfSummarySortInit) return;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
372 window.__perfSummarySortInit = true;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
373
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
374 function initPerfSummarySorting() {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
375 // Record original order for "back to original"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
376 document.querySelectorAll('table.performance-summary tbody').forEach(tbody => {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
377 Array.from(tbody.rows).forEach((row, i) => { row.dataset.originalOrder = i; });
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
378 });
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
379
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
380 const getText = td => (td?.innerText || '').trim();
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
381 const cmp = (idx, asc) => (a, b) => {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
382 const v1 = getText(a.children[idx]);
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
383 const v2 = getText(b.children[idx]);
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
384 const n1 = parseFloat(v1), n2 = parseFloat(v2);
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
385 if (!isNaN(n1) && !isNaN(n2)) return asc ? n1 - n2 : n2 - n1; // numeric
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
386 return asc ? v1.localeCompare(v2) : v2.localeCompare(v1); // lexical
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
387 };
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
388
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
389 document.querySelectorAll('table.performance-summary th.sortable').forEach(th => {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
390 // initialize to "none"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
391 th.classList.remove('sorted-asc','sorted-desc');
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
392 th.classList.add('sorted-none');
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
393
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
394 th.addEventListener('click', () => {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
395 const table = th.closest('table');
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
396 const headerRow = th.parentNode;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
397 const allTh = headerRow.querySelectorAll('th.sortable');
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
398 const tbody = table.querySelector('tbody');
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
399
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
400 // Determine current state BEFORE clearing
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
401 const isAsc = th.classList.contains('sorted-asc');
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
402 const isDesc = th.classList.contains('sorted-desc');
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
403
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
404 // Reset all headers in this row
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
405 allTh.forEach(x => x.classList.remove('sorted-asc','sorted-desc','sorted-none'));
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
406
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
407 // Compute next state
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
408 let next;
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
409 if (!isAsc && !isDesc) {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
410 next = 'asc';
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
411 } else if (isAsc) {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
412 next = 'desc';
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
413 } else {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
414 next = 'none';
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
415 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
416 th.classList.add('sorted-' + next);
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
417
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
418 // Sort rows according to the chosen state
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
419 const rows = Array.from(tbody.rows);
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
420 if (next === 'none') {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
421 rows.sort((a, b) => (a.dataset.originalOrder - b.dataset.originalOrder));
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
422 } else {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
423 const idx = Array.from(headerRow.children).indexOf(th);
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
424 rows.sort(cmp(idx, next === 'asc'));
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
425 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
426 rows.forEach(r => tbody.appendChild(r));
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
427 });
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
428 });
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
429 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
430
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
431 // Run after DOM is ready
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
432 if (document.readyState === 'loading') {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
433 document.addEventListener('DOMContentLoaded', initPerfSummarySorting);
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
434 } else {
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
435 initPerfSummarySorting();
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
436 }
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
437 })();
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
438 </script>
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
439 </head>
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
440 <body>
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
441 <div class="container">
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
442 """
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
443
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
444
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
445 def get_html_closing():
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
446 """Closes .container, body, and html."""
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
447 return """
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
448 </div>
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
449 </body>
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
450 </html>
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
451 """
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
452
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
453
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
454 def encode_image_to_base64(image_path: str) -> str:
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
455 """Convert an image file to a base64 encoded string."""
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
456 with open(image_path, "rb") as img_file:
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
457 return base64.b64encode(img_file.read()).decode("utf-8")
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
458
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
459
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
460 def json_to_nested_html_table(json_data, depth: int = 0) -> str:
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
461 """
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
462 Convert a JSON-able object to an HTML nested table.
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
463 Renders dicts as two-column tables (key/value) and lists as index/value rows.
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
464 """
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
465 # Base case: flat dict (no nested dict/list values)
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
466 if isinstance(json_data, dict) and all(
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
467 not isinstance(v, (dict, list)) for v in json_data.values()
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
468 ):
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
469 rows = [
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
470 f"<tr><th>{key}</th><td>{value}</td></tr>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
471 for key, value in json_data.items()
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
472 ]
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
473 return f"<table>{''.join(rows)}</table>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
474
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
475 # Base case: list of simple values
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
476 if isinstance(json_data, list) and all(
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
477 not isinstance(v, (dict, list)) for v in json_data
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
478 ):
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
479 rows = [
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
480 f"<tr><th>Index {i}</th><td>{value}</td></tr>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
481 for i, value in enumerate(json_data)
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
482 ]
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
483 return f"<table>{''.join(rows)}</table>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
484
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
485 # Recursive cases
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
486 if isinstance(json_data, dict):
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
487 rows = [
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
488 (
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
489 f"<tr><th style='text-align:left;padding-left:{depth * 20}px;'>{key}</th>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
490 f"<td>{json_to_nested_html_table(value, depth + 1)}</td></tr>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
491 )
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
492 for key, value in json_data.items()
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
493 ]
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
494 return f"<table>{''.join(rows)}</table>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
495
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
496 if isinstance(json_data, list):
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
497 rows = [
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
498 (
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
499 f"<tr><th style='text-align:left;padding-left:{depth * 20}px;'>[{i}]</th>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
500 f"<td>{json_to_nested_html_table(value, depth + 1)}</td></tr>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
501 )
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
502 for i, value in enumerate(json_data)
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
503 ]
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
504 return f"<table>{''.join(rows)}</table>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
505
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
506 # Primitive
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
507 return f"{json_data}"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
508
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
509
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
510 def json_to_html_table(json_data) -> str:
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
511 """
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
512 Convert JSON (dict or string) into a vertically oriented HTML table.
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
513 """
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
514 if isinstance(json_data, str):
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
515 json_data = json.loads(json_data)
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
516 return json_to_nested_html_table(json_data)
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
517
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
518
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
519 def build_tabbed_html(metrics_html: str, train_val_html: str, test_html: str) -> str:
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
520 """
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
521 Build a 3-tab interface:
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
522 - Config and Results Summary
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
523 - Train/Validation Results
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
524 - Test Results
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
525 Includes a persistent "Help" button that toggles the metrics modal.
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
526 """
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
527 return f"""
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
528 <div class="tabs">
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
529 <div class="tab active" onclick="showTab('metrics')">Config and Results Summary</div>
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
530 <div class="tab" onclick="showTab('trainval')">Train/Validation Results</div>
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
531 <div class="tab" onclick="showTab('test')">Test Results</div>
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
532 <button id="openMetricsHelp" class="help-btn" title="Open metrics help">Help</button>
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
533 </div>
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
534
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
535 <div id="metrics" class="tab-content active">
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
536 {metrics_html}
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
537 </div>
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
538 <div id="trainval" class="tab-content">
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
539 {train_val_html}
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
540 </div>
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
541 <div id="test" class="tab-content">
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
542 {test_html}
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
543 </div>
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
544
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
545 <script>
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
546 function showTab(id) {{
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
547 document.querySelectorAll('.tab-content').forEach(el => el.classList.remove('active'));
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
548 document.querySelectorAll('.tab').forEach(el => el.classList.remove('active'));
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
549 document.getElementById(id).classList.add('active');
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
550 // find tab with matching onclick target
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
551 document.querySelectorAll('.tab').forEach(t => {{
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
552 if (t.getAttribute('onclick') && t.getAttribute('onclick').includes(id)) {{
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
553 t.classList.add('active');
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
554 }}
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
555 }});
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
556 }}
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
557 </script>
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
558 """
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
559
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
560
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
561 def get_metrics_help_modal() -> str:
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
562 """
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
563 Returns a ready-to-use modal with a comprehensive metrics guide and
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
564 the small script that wires the "Help" button to open/close the modal.
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
565 """
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
566 modal_html = (
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
567 '<div id="metricsHelpModal" class="modal">'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
568 ' <div class="modal-content">'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
569 ' <span class="close">×</span>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
570 " <h2>Model Evaluation Metrics — Help Guide</h2>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
571 ' <div class="metrics-guide">'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
572 ' <h3>1) General Metrics (Regression and Classification)</h3>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
573 ' <p><strong>Loss (Regression & Classification):</strong> '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
574 'Measures the difference between predicted and actual values, '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
575 'optimized during training. Lower is better. '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
576 'For regression, this is often Mean Squared Error (MSE) or '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
577 'Mean Absolute Error (MAE). For classification, it\'s typically '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
578 'cross-entropy or log loss.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
579 ' <h3>2) Regression Metrics</h3>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
580 ' <p><strong>Mean Absolute Error (MAE):</strong> '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
581 'Average of absolute differences between predicted and actual values, '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
582 'in the same units as the target. Use for interpretable error measurement '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
583 'when all errors are equally important. Less sensitive to outliers than MSE.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
584 ' <p><strong>Mean Squared Error (MSE):</strong> '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
585 'Average of squared differences between predicted and actual values. '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
586 'Penalizes larger errors more heavily, useful when large deviations are critical. '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
587 'Often used as the loss function in regression.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
588 ' <p><strong>Root Mean Squared Error (RMSE):</strong> '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
589 'Square root of MSE, in the same units as the target. '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
590 'Balances interpretability and sensitivity to large errors. '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
591 'Widely used for regression evaluation.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
592 ' <p><strong>Mean Absolute Percentage Error (MAPE):</strong> '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
593 'Average absolute error as a percentage of actual values. '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
594 'Scale-independent, ideal for comparing relative errors across datasets. '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
595 'Avoid when actual values are near zero.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
596 ' <p><strong>Root Mean Squared Percentage Error (RMSPE):</strong> '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
597 'Square root of mean squared percentage error. Scale-independent, '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
598 'penalizes larger relative errors more than MAPE. Use for forecasting '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
599 'or when relative accuracy matters.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
600 ' <p><strong>R² Score:</strong> Proportion of variance in the target '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
601 'explained by the model. Ranges from negative infinity to 1 (perfect prediction). '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
602 'Use to assess model fit; negative values indicate poor performance '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
603 'compared to predicting the mean.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
604 ' <h3>3) Classification Metrics</h3>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
605 ' <p><strong>Accuracy:</strong> Proportion of correct predictions '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
606 'among all predictions. Simple but misleading for imbalanced datasets, '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
607 'where high accuracy may hide poor performance on minority classes.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
608 ' <p><strong>Micro Accuracy:</strong> Sums true positives and true negatives '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
609 'across all classes before computing accuracy. Suitable for multiclass or '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
610 'multilabel problems with imbalanced data.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
611 ' <p><strong>Token Accuracy:</strong> Measures how often predicted tokens '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
612 '(e.g., in sequences) match true tokens. Common in NLP tasks like text generation '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
613 'or token classification.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
614 ' <p><strong>Precision:</strong> Proportion of positive predictions that are '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
615 'correct (TP / (TP + FP)). Use when false positives are costly, e.g., spam detection.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
616 ' <p><strong>Recall (Sensitivity):</strong> Proportion of actual positives '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
617 'correctly predicted (TP / (TP + FN)). Use when missing positives is risky, '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
618 'e.g., disease detection.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
619 ' <p><strong>Specificity:</strong> True negative rate (TN / (TN + FP)). '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
620 'Measures ability to identify negatives. Useful in medical testing to avoid '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
621 'false alarms.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
622 ' <h3>4) Classification: Macro, Micro, and Weighted Averages</h3>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
623 ' <p><strong>Macro Precision / Recall / F1:</strong> Averages the metric '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
624 'across all classes, treating each equally. Best for balanced datasets where '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
625 'all classes are equally important.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
626 ' <p><strong>Micro Precision / Recall / F1:</strong> Aggregates true positives, '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
627 'false positives, and false negatives across all classes before computing. '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
628 'Ideal for imbalanced or multilabel classification.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
629 ' <p><strong>Weighted Precision / Recall / F1:</strong> Averages metrics '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
630 'across classes, weighted by the number of true instances per class. Balances '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
631 'class importance based on frequency.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
632 ' <h3>5) Classification: Average Precision (PR-AUC Variants)</h3>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
633 ' <p><strong>Average Precision Macro:</strong> Precision-Recall AUC averaged '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
634 'equally across classes. Use for balanced multiclass problems.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
635 ' <p><strong>Average Precision Micro:</strong> Global Precision-Recall AUC '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
636 'using all instances. Best for imbalanced or multilabel classification.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
637 ' <p><strong>Average Precision Samples:</strong> Precision-Recall AUC averaged '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
638 'across individual samples. Ideal for multilabel tasks where samples have multiple '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
639 'labels.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
640 ' <h3>6) Classification: ROC-AUC Variants</h3>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
641 ' <p><strong>ROC-AUC:</strong> Measures ability to distinguish between classes. '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
642 'AUC = 1 is perfect; 0.5 is random guessing. Use for binary classification.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
643 ' <p><strong>Macro ROC-AUC:</strong> Averages AUC across all classes equally. '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
644 'Suitable for balanced multiclass problems.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
645 ' <p><strong>Micro ROC-AUC:</strong> Computes AUC from aggregated predictions '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
646 'across all classes. Useful for imbalanced or multilabel settings.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
647 ' <h3>7) Classification: Confusion Matrix Stats (Per Class)</h3>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
648 ' <p><strong>True Positives / Negatives (TP / TN):</strong> Correct predictions '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
649 'for positives and negatives, respectively.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
650 ' <p><strong>False Positives / Negatives (FP / FN):</strong> Incorrect predictions '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
651 '— false alarms and missed detections.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
652 ' <h3>8) Classification: Ranking Metrics</h3>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
653 ' <p><strong>Hits at K:</strong> Measures whether the true label is among the '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
654 'top-K predictions. Common in recommendation systems and retrieval tasks.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
655 ' <h3>9) Other Metrics (Classification)</h3>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
656 ' <p><strong>Cohen\'s Kappa:</strong> Measures agreement between predicted and '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
657 'actual labels, adjusted for chance. Useful for multiclass classification with '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
658 'imbalanced data.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
659 ' <p><strong>Matthews Correlation Coefficient (MCC):</strong> Balanced measure '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
660 'using TP, TN, FP, and FN. Effective for imbalanced datasets.</p>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
661 ' <h3>10) Metric Recommendations</h3>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
662 ' <ul>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
663 ' <li><strong>Regression:</strong> Use <strong>RMSE</strong> or '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
664 '<strong>MAE</strong> for general evaluation, <strong>MAPE</strong> for relative '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
665 'errors, and <strong>R²</strong> to assess model fit. Use <strong>MSE</strong> or '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
666 '<strong>RMSPE</strong> when large errors are critical.</li>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
667 ' <li><strong>Classification (Balanced Data):</strong> Use <strong>Accuracy</strong> '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
668 'and <strong>F1</strong> for overall performance.</li>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
669 ' <li><strong>Classification (Imbalanced Data):</strong> Use <strong>Precision</strong>, '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
670 '<strong>Recall</strong>, and <strong>ROC-AUC</strong> to focus on minority class '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
671 'performance.</li>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
672 ' <li><strong>Multilabel or Imbalanced Classification:</strong> Use '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
673 '<strong>Micro Precision/Recall/F1</strong> or <strong>Micro ROC-AUC</strong>.</li>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
674 ' <li><strong>Balanced Multiclass:</strong> Use <strong>Macro Precision/Recall/F1</strong> '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
675 'or <strong>Macro ROC-AUC</strong>.</li>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
676 ' <li><strong>Class Frequency Matters:</strong> Use <strong>Weighted Precision/Recall/F1</strong> '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
677 'to account for class imbalance.</li>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
678 ' <li><strong>Recommendation/Ranking:</strong> Use <strong>Hits at K</strong> for retrieval tasks.</li>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
679 ' <li><strong>Detailed Analysis:</strong> Use <strong>Confusion Matrix stats</strong> '
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
680 'for class-wise performance in classification.</li>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
681 ' </ul>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
682 ' </div>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
683 ' </div>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
684 '</div>'
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
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685 )
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
686
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
687 modal_js = (
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
688 "<script>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
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diff changeset
689 "document.addEventListener('DOMContentLoaded', function() {"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
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diff changeset
690 " var modal = document.getElementById('metricsHelpModal');"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
691 " var openBtn = document.getElementById('openMetricsHelp');"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
692 " var closeBtn = modal ? modal.querySelector('.close') : null;"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
693 " if (openBtn && modal) {"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
694 " openBtn.addEventListener('click', function(){ modal.style.display = 'block'; });"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
695 " }"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
696 " if (closeBtn && modal) {"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
697 " closeBtn.addEventListener('click', function(){ modal.style.display = 'none'; });"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
698 " }"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
699 " window.addEventListener('click', function(ev){"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
700 " if (ev.target === modal) { modal.style.display = 'none'; }"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
701 " });"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
702 "});"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
703 "</script>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
704 )
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
705 return modal_html + modal_js
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
706
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
707 # -----------------------------------------
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
708 # MODEL PERFORMANCE (Train/Val/Test) TABLE
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
709 # -----------------------------------------
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
710
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
711
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
712 def format_stats_table_html(train_stats: dict, test_stats: dict, output_type: str) -> str:
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
713 """Formats a combined HTML table for training, validation, and test metrics."""
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
714 all_metrics = extract_metrics_from_json(train_stats, test_stats, output_type)
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
715 rows = []
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
716 for metric_key in sorted(all_metrics["training"].keys()):
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
717 if (
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
718 metric_key in all_metrics["validation"]
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
719 and metric_key in all_metrics["test"]
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
720 ):
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
721 display_name = METRIC_DISPLAY_NAMES.get(
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
722 metric_key,
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
723 metric_key.replace("_", " ").title(),
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
724 )
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
725 t = all_metrics["training"].get(metric_key)
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
726 v = all_metrics["validation"].get(metric_key)
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
727 te = all_metrics["test"].get(metric_key)
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
728 if all(x is not None for x in [t, v, te]):
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
729 rows.append([display_name, f"{t:.4f}", f"{v:.4f}", f"{te:.4f}"])
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
730
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
731 if not rows:
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
732 return "<table><tr><td>No metric values found.</td></tr></table>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
733
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
734 html = (
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
735 "<h2 style='text-align: center;'>Model Performance Summary</h2>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
736 "<div style='display: flex; justify-content: center;'>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
737 "<table class='performance-summary' style='border-collapse: collapse;'>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
738 "<thead><tr>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
739 "<th class='sortable' style='padding: 10px; border: 1px solid #ccc; text-align: left; white-space: nowrap;'>Metric</th>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
740 "<th class='sortable' style='padding: 10px; border: 1px solid #ccc; text-align: center; white-space: nowrap;'>Train</th>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
741 "<th class='sortable' style='padding: 10px; border: 1px solid #ccc; text-align: center; white-space: nowrap;'>Validation</th>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
742 "<th class='sortable' style='padding: 10px; border: 1px solid #ccc; text-align: center; white-space: nowrap;'>Test</th>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
743 "</tr></thead><tbody>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
744 )
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
745 for row in rows:
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
746 html += generate_table_row(
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
747 row,
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
748 "padding: 10px; border: 1px solid #ccc; text-align: center; white-space: nowrap;",
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
749 )
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
750 html += "</tbody></table></div><br>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
751 return html
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
752
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
753 # -------------------------------------------
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
754 # TRAIN/VALIDATION PERFORMANCE SUMMARY TABLE
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
755 # -------------------------------------------
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
756
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
757
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
758 def format_train_val_stats_table_html(train_stats: dict, test_stats: dict) -> str:
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
759 """Format train/validation metrics into an HTML table."""
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
760 all_metrics = extract_metrics_from_json(train_stats, test_stats, detect_output_type(test_stats))
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
761 rows = []
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
762 for metric_key in sorted(all_metrics["training"].keys()):
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
763 if metric_key in all_metrics["validation"]:
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
764 display_name = METRIC_DISPLAY_NAMES.get(
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
765 metric_key,
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
766 metric_key.replace("_", " ").title(),
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
767 )
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
768 t = all_metrics["training"].get(metric_key)
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
769 v = all_metrics["validation"].get(metric_key)
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
770 if t is not None and v is not None:
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
771 rows.append([display_name, f"{t:.4f}", f"{v:.4f}"])
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
772
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
773 if not rows:
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
774 return "<table><tr><td>No metric values found for Train/Validation.</td></tr></table>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
775
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
776 html = (
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
777 "<h2 style='text-align: center;'>Train/Validation Performance Summary</h2>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
778 "<div style='display: flex; justify-content: center;'>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
779 "<table class='performance-summary' style='border-collapse: collapse;'>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
780 "<thead><tr>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
781 "<th class='sortable' style='padding: 10px; border: 1px solid #ccc; text-align: left; white-space: nowrap;'>Metric</th>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
782 "<th class='sortable' style='padding: 10px; border: 1px solid #ccc; text-align: center; white-space: nowrap;'>Train</th>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
783 "<th class='sortable' style='padding: 10px; border: 1px solid #ccc; text-align: center; white-space: nowrap;'>Validation</th>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
784 "</tr></thead><tbody>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
785 )
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
786 for row in rows:
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
787 html += generate_table_row(
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
788 row,
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
789 "padding: 10px; border: 1px solid #ccc; text-align: center; white-space: nowrap;",
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
790 )
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
791 html += "</tbody></table></div><br>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
792 return html
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
793
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
794 # -----------------------------------------
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
795 # TEST‐ONLY PERFORMANCE SUMMARY TABLE
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
796 # -----------------------------------------
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
797
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
798
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
799 def format_test_merged_stats_table_html(
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
800 test_metrics: Dict[str, Any], output_type: str
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
801 ) -> str:
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
802 """Format test metrics into an HTML table."""
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
803 rows = []
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
804 for key in sorted(test_metrics.keys()):
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
805 display_name = METRIC_DISPLAY_NAMES.get(key, key.replace("_", " ").title())
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
806 value = test_metrics[key]
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
807 if value is not None:
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
808 rows.append([display_name, f"{value:.4f}"])
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
809
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
810 if not rows:
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
811 return "<table><tr><td>No test metric values found.</td></tr></table>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
812
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
813 html = (
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
814 "<h2 style='text-align: center;'>Test Performance Summary</h2>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
815 "<div style='display: flex; justify-content: center;'>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
816 "<table class='performance-summary' style='border-collapse: collapse;'>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
817 "<thead><tr>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
818 "<th class='sortable' style='padding: 10px; border: 1px solid #ccc; text-align: left; white-space: nowrap;'>Metric</th>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
819 "<th class='sortable' style='padding: 10px; border: 1px solid #ccc; text-align: center; white-space: nowrap;'>Test</th>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
820 "</tr></thead><tbody>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
821 )
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
822 for row in rows:
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
823 html += generate_table_row(
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
824 row,
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
825 "padding: 10px; border: 1px solid #ccc; text-align: center; white-space: nowrap;",
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
826 )
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
827 html += "</tbody></table></div><br>"
bcfa2e234a80 planemo upload for repository https://github.com/goeckslab/gleam.git commit 96bab8325992d16fcaad8e0a4dc4c62b00e2abc2
goeckslab
parents:
diff changeset
828 return html