Mercurial > repos > goeckslab > ludwig_config_generator
diff utils.py @ 0:183adfc24076 draft default tip
planemo upload for repository https://github.com/goeckslab/Galaxy-Ludwig.git commit bdea9430787658783a51cc6c2ae951a01e455bb4
| author | goeckslab |
|---|---|
| date | Tue, 07 Jan 2025 22:46:36 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/utils.py Tue Jan 07 22:46:36 2025 +0000 @@ -0,0 +1,156 @@ +import base64 +import json + + +def get_html_template(): + return """ + <html> + <head> + <title>Galaxy-Ludwig Report</title> + <style> + body { + font-family: Arial, sans-serif; + margin: 0; + padding: 20px; + background-color: #f4f4f4; + } + .container { + max-width: 800px; + margin: auto; + background: white; + padding: 20px; + box-shadow: 0 0 10px rgba(0, 0, 0, 0.1); + overflow-x: auto; + } + h1 { + text-align: center; + color: #333; + } + h2 { + border-bottom: 2px solid #4CAF50; + color: #4CAF50; + padding-bottom: 5px; + } + table { + border-collapse: collapse; + margin: 20px 0; + width: 100%; + table-layout: fixed; /* Enforces consistent column widths */ + } + table, th, td { + border: 1px solid #ddd; + } + th, td { + padding: 8px; + text-align: center; /* Center-align text */ + vertical-align: middle; /* Center-align content vertically */ + word-wrap: break-word; /* Break long words to avoid overflow */ + } + th:first-child, td:first-child { + width: 5%; /* Smaller width for the first column */ + } + th:nth-child(2), td:nth-child(2) { + width: 50%; /* Wider for the metric/description column */ + } + th:last-child, td:last-child { + width: 25%; /* Value column gets remaining space */ + } + th { + background-color: #4CAF50; + color: white; + } + .plot { + text-align: center; + margin: 20px 0; + } + .plot img { + max-width: 100%; + height: auto; + } + </style> + </head> + <body> + <div class="container"> + """ + + +def get_html_closing(): + return """ + </div> + </body> + </html> + """ + + +def encode_image_to_base64(image_path): + """Convert an image file to a base64 encoded string.""" + with open(image_path, "rb") as img_file: + return base64.b64encode(img_file.read()).decode("utf-8") + + +def json_to_nested_html_table(json_data, depth=0): + """ + Convert JSON object to an HTML nested table. + + Parameters: + json_data (dict or list): The JSON data to convert. + depth (int): Current depth level for indentation. + + Returns: + str: HTML string for the nested table. + """ + # Base case: if JSON is a simple key-value pair dictionary + if isinstance(json_data, dict) and all( + not isinstance(v, (dict, list)) for v in json_data.values() + ): + # Render a flat table + rows = [ + f"<tr><th>{key}</th><td>{value}</td></tr>" + for key, value in json_data.items() + ] + return f"<table>{''.join(rows)}</table>" + + # Base case: if JSON is a list of simple values + if isinstance(json_data, list) and all( + not isinstance(v, (dict, list)) for v in json_data + ): + rows = [ + f"<tr><th>Index {i}</th><td>{value}</td></tr>" + for i, value in enumerate(json_data) + ] + return f"<table>{''.join(rows)}</table>" + + # Recursive case: if JSON contains nested structures + if isinstance(json_data, dict): + rows = [ + f"<tr><th style='padding-left:{depth * 20}px;'>{key}</th>" + f"<td>{json_to_nested_html_table(value, depth + 1)}</td></tr>" + for key, value in json_data.items() + ] + return f"<table>{''.join(rows)}</table>" + + if isinstance(json_data, list): + rows = [ + f"<tr><th style='padding-left:{depth * 20}px;'>[{i}]</th>" + f"<td>{json_to_nested_html_table(value, depth + 1)}</td></tr>" + for i, value in enumerate(json_data) + ] + return f"<table>{''.join(rows)}</table>" + + # Base case: simple value + return f"{json_data}" + + +def json_to_html_table(json_data): + """ + Convert JSON to a vertically oriented HTML table. + + Parameters: + json_data (str or dict): JSON string or dictionary. + + Returns: + str: HTML table representation. + """ + if isinstance(json_data, str): + json_data = json.loads(json_data) + return json_to_nested_html_table(json_data)