Mercurial > repos > goeckslab > mesmer
view macros.xml @ 1:02abff468d60 draft
planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/mesmer commit 374e4528db4e3ce7984e2ed2c2bae55c19c17371
author | goeckslab |
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date | Thu, 10 Nov 2022 20:38:34 +0000 |
parents | 53240d7c1fc5 |
children | 187918c47051 |
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<?xml version="1.0"?> <macros> <xml name="requirements"> <requirements> <container type="docker">quay.io/goeckslab/mesmer:@TOOL_VERSION@</container> </requirements> </xml> <xml name="stdio"> <stdio> <regex match="MemoryError" source="both" level="fatal_oom" description="Out of Memory" /> <regex match="std::bad_alloc" source="both" level="fatal_oom" description="Out of Memory" /> <regex match="java.lang.OutOfMemoryError" source="both" level="fatal_oom" description="Out of Memory" /> <regex match="Out of memory" source="both" level="fatal_oom" description="Out of Memory" /> </stdio> </xml> <xml name="version_cmd"> <version_command>@CMD_BEGIN@ --help</version_command> </xml> <xml name="citations"> <citations> <citation type="doi">10.1038/s41587-021-01094-0</citation> </citations> </xml> <token name="@TOOL_VERSION@">0.3.1</token> <token name="@VERSION_SUFFIX@">1</token> <token name="@CMD_BEGIN@">python /usr/src/app/run_app.py mesmer</token> </macros>