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planemo upload for repository https://github.com/goeckslab/gleam commit 4dc221b2fa9717552787f0985ad3fc3df4460158
author goeckslab
date Sat, 21 Jun 2025 15:07:04 +0000 (9 days ago)
parents ccd798db5abb
children
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ccd798db5abb planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
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1 FROM python:3.11-slim
ccd798db5abb planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
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ccd798db5abb planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
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3 ARG VERSION=3.3.2
ccd798db5abb planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
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ccd798db5abb planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
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5 # Install necessary dependencies, including libgomp1
ccd798db5abb planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
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6 RUN apt-get update && \
ccd798db5abb planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
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7 apt-get install -y --no-install-recommends git unzip libgomp1 && \
ccd798db5abb planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
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8 rm -rf /var/lib/apt/lists/*
ccd798db5abb planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
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ccd798db5abb planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
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10 # Install Python packages
ccd798db5abb planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
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11 RUN pip install -U pip && \
ccd798db5abb planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
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12 pip install --no-cache-dir --no-compile joblib && \
ccd798db5abb planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
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13 pip install --no-cache-dir --no-compile h5py && \
ccd798db5abb planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
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14 pip install --no-cache-dir --no-compile pycaret[analysis,models]==${VERSION} && \
ccd798db5abb planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
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15 pip install --no-cache-dir --no-compile explainerdashboard
ccd798db5abb planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
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ccd798db5abb planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
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17 # Clean up unnecessary packages
ccd798db5abb planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
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18 RUN apt-get -y autoremove && apt-get clean && \
ccd798db5abb planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit cf47efb521b91a9cb44ae5c5ade860627f9b9030
goeckslab
parents:
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19 rm -rf /var/lib/apt/lists/*