Mercurial > repos > goeckslab > rename_tiff_channels

comparison test-data/test.xml @ 6:4763362914f4 draft default tip

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planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/mti-utils commit 5c324d06ad54dca76aa2b4c8118df5654f49da66
author goeckslab
date Mon, 15 Jul 2024 21:37:39 +0000
parents 61fd94c7ce42
children
comparison
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5:61fd94c7ce42 6:4763362914f4
1 <?xml version='1.0' encoding='utf-8'?>
2 <OME xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" UUID="urn:uuid:be7b96c1-399b-41a1-a9f8-ab50da05159b" xsi:schemaLocation="http://www.openmicroscopy.org/Schemas/OME/2016-06 http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd"><Image ID="Image:0"><Pixels BigEndian="false" DimensionOrder="XYZCT" ID="Pixels:0" PhysicalSizeX="0.6499999761581421" PhysicalSizeXUnit="µm" PhysicalSizeY="0.6499999761581421" PhysicalSizeYUnit="µm" SizeC="32" SizeT="1" SizeX="13720" SizeY="9420" SizeZ="1" Type="uint16"><Channel ID="Channel:0:0" Name="DNA" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:1" Name="Control-488nm" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:2" Name="Control-555nm" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:3" Name="Control-647nm" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:4" Name="DNA (2)" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:5" Name="ERK-1 (pT202; pY204)" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:6" Name="ERK-1 (pT202; pY204) (2)" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:7" Name="hRAD51" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:8" Name="DNA (3)" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:9" Name="G1/S-specific cyclin-D1" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:10" Name="Vimentin" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:11" Name="Aortic smooth muscle actin" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:12" Name="DNA (4)" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:13" Name="E-cadherin" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:14" Name="ER" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:15" Name="PR" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:16" Name="DNA (5)" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:17" Name="Epidermal growth factor receptor" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:18" Name="Rb (pS807; pS811)" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:19" Name="CD45" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:20" Name="DNA (6)" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:21" Name="Antigen Ki67" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:22" Name="CK-19" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:23" Name="p21" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:24" Name="DNA (7)" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:25" Name="CK-14" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:26" Name="Androgen Receptor" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:27" Name="Cleaved PARP-1" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:28" Name="DNA (8)" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:29" Name="CK-17" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:30" Name="CK-7" SamplesPerPixel="1"><LightPath /></Channel><Channel ID="Channel:0:31" Name="HER2" SamplesPerPixel="1"><LightPath /></Channel><TiffData IFD="0" PlaneCount="32" /><Plane TheC="0" TheT="0" TheZ="0" /><Plane TheC="1" TheT="0" TheZ="0" /><Plane TheC="2" TheT="0" TheZ="0" /><Plane TheC="3" TheT="0" TheZ="0" /><Plane TheC="4" TheT="0" TheZ="0" /><Plane TheC="5" TheT="0" TheZ="0" /><Plane TheC="6" TheT="0" TheZ="0" /><Plane TheC="7" TheT="0" TheZ="0" /><Plane TheC="8" TheT="0" TheZ="0" /><Plane TheC="9" TheT="0" TheZ="0" /><Plane TheC="10" TheT="0" TheZ="0" /><Plane TheC="11" TheT="0" TheZ="0" /><Plane TheC="12" TheT="0" TheZ="0" /><Plane TheC="13" TheT="0" TheZ="0" /><Plane TheC="14" TheT="0" TheZ="0" /><Plane TheC="15" TheT="0" TheZ="0" /><Plane TheC="16" TheT="0" TheZ="0" /><Plane TheC="17" TheT="0" TheZ="0" /><Plane TheC="18" TheT="0" TheZ="0" /><Plane TheC="19" TheT="0" TheZ="0" /><Plane TheC="20" TheT="0" TheZ="0" /><Plane TheC="21" TheT="0" TheZ="0" /><Plane TheC="22" TheT="0" TheZ="0" /><Plane TheC="23" TheT="0" TheZ="0" /><Plane TheC="24" TheT="0" TheZ="0" /><Plane TheC="25" TheT="0" TheZ="0" /><Plane TheC="26" TheT="0" TheZ="0" /><Plane TheC="27" TheT="0" TheZ="0" /><Plane TheC="28" TheT="0" TheZ="0" /><Plane TheC="29" TheT="0" TheZ="0" /><Plane TheC="30" TheT="0" TheZ="0" /><Plane TheC="31" TheT="0" TheZ="0" /></Pixels></Image></OME>