Mercurial > repos > goeckslab > scimap_mcmicro_to_anndata

comparison mcmicro_to_anndata.xml @ 5:b1ead1b7e0aa draft default tip

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planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 78a4f1a616a9b7f7ca71cdf32e6a63a1daeec8bf
author goeckslab
date Wed, 11 Jun 2025 22:18:38 +0000
parents 4c767e1a9e7c
children
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4:49c178651194 5:b1ead1b7e0aa
13 --outfile '$outfile' 13 --outfile '$outfile'
14 14
15 ]]> 15 ]]>
16 </command> 16 </command>
17 <configfiles> 17 <configfiles>
18 <inputs name="inputs" data_style="paths"/> 18 <inputs name="inputs" data_style="staging_path_and_source_path"/>
19 </configfiles> 19 </configfiles>
20 <inputs> 20 <inputs>
21 <param argument="image_path" type="data" format="tabular,csv" multiple="false" label="Select the input image or images" /> 21 <param argument="image_path" type="data" format="tabular,csv" multiple="false" label="Select the input image or images" />
22 <param argument="drop_markers" type="text" optional="true" label="List of markers to drop from the analysis" help="No quotes, separated by comma. e.g. CD3D, CD20." /> 22 <param argument="drop_markers" type="text" optional="true" label="List of markers to drop from the analysis" help="No quotes, separated by comma. e.g. CD3D, CD20." />
23 <section name="options" title="Advanced Options" expanded="False"> 23 <section name="options" title="Advanced Options" expanded="False">