Mercurial > repos > goeckslab > vitessce_spatial

diff vitessce_spatial.xml @ 5:97be83fc3677 draft

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planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/vitessce commit 90f081e58b5ee41bba3a7e6f01d97b5bd9392759
author goeckslab
date Wed, 28 May 2025 21:14:59 +0000
parents 068da7f7cd83
children 70c8be4d59e9
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line diff
--- a/vitessce_spatial.xml	Thu Feb 20 19:47:16 2025 +0000
+++ b/vitessce_spatial.xml	Wed May 28 21:14:59 2025 +0000
@@ -16,6 +16,14 @@
 
     <configfiles>
         <inputs name="inputs" />
+        <configfile name="galaxy_config">
+            <![CDATA[
+            {
+            "galaxy_url": "${__app__.config.galaxy_infrastructure_url}",
+            "dataset_id": "${__app__.security.encode_id($output.dataset.id)}"
+            }
+                    ]]>
+        </configfile>
     </configfiles>
 
     <inputs>
@@ -88,7 +96,12 @@
     </inputs>
     <outputs>
         <data format="html" name="output" />
-        <data format="json" name="vitessce_config" from_work_dir="config.json" hidden="true" label="Vitessce config file on ${on_string}" />
+        <data format="json" 
+              name="vitessce_config" 
+              from_work_dir="config.json" 
+              hidden="true" 
+              label="Vitessce config file on ${on_string}">
+        </data>
     </outputs>
     <tests>
         <test>