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2
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1 <macros>
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2 <token name="@WRAPPER_VERSION@">1.9</token>
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3 <xml name="citation1">
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4 <citation type="doi">10.1093/bioinformatics/btp352</citation>
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5 </xml>
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6 <token name="@PREPARE_ENV@">
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7 <![CDATA[
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8 export BCFTOOLS_PLUGINS=\$(dirname `which bcftools`)/../libexec/bcftools;
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9 ]]>
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10 </token>
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11 <token name="@THREADS@">
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12 --threads \${GALAXY_SLOTS:-4}
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13 </token>
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14 <xml name="vcf_output">
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15 <data name="output" format="vcf">
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16 <change_format>
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17 <when input="output_type" value="b" format="bcf" />
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18 <when input="output_type" value="u" format="bcf" />
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19 <when input="output_type" value="z" format="vcf_bgzip" />
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20 <when input="output_type" value="v" format="vcf" />
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21 </change_format>
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22 </data>
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23 </xml>
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24 </macros>
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25
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