Mercurial > repos > greg > cfsan_snp_pipeline_snp_matrix

comparison macros.xml @ 1:f3485a9e51a3 draft

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author greg
date Wed, 22 Nov 2023 20:04:57 +0000
parents 6b0a13deae92
children 610251aac6ef
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0:6b0a13deae92 1:f3485a9e51a3
5 <xml name="requirements"> 5 <xml name="requirements">
6 <requirements> 6 <requirements>
7 <requirement type="package" version="@TOOL_VERSION@">snp-pipeline</requirement> 7 <requirement type="package" version="@TOOL_VERSION@">snp-pipeline</requirement>
8 <requirement type="package" version="3.6.8">python</requirement> 8 <requirement type="package" version="3.6.8">python</requirement>
9 </requirements> 9 </requirements>
10 </xml>
11 <xml name="input_type_cond">
12 <conditional name="input_type_cond">
13 <param name="input_type" type="select" label="Choose the category for the files to be analyzed">
14 <option value="single" selected="true">Single files</option>
15 <option value="collection">Collection of files</option>
16 </param>
17 <when value="single">
18 <param name="input_fasta" type="data" format="fasta" label="FASTA file"/>
19 </when>
20 <when value="collection">
21 <param name="input_fasta_collection" type="data_collection" format="fasta" collection_type="list" label="Collection of fasta files"/>
22 </when>
23 </conditional>
24 </xml> 10 </xml>
25 <xml name="reference_cond"> 11 <xml name="reference_cond">
26 <conditional name="reference_cond"> 12 <conditional name="reference_cond">
27 <param name="reference_source" type="select" label="Choose the source for the reference genome"> 13 <param name="reference_source" type="select" label="Choose the source for the reference genome">
28 <option value="cached" selected="true">locally cached</option> 14 <option value="cached" selected="true">locally cached</option>