Mercurial > repos > greg > data_manager_vsnp_dnaprints

diff data_manager/vsnp_dnaprints_fetcher.xml @ 1:5c4173a0b2c6 draft

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author greg
date Tue, 05 May 2020 15:08:48 -0400
parents f58178a5eebc
children
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--- a/data_manager/vsnp_dnaprints_fetcher.xml	Fri Feb 14 13:41:36 2020 -0500
+++ b/data_manager/vsnp_dnaprints_fetcher.xml	Tue May 05 15:08:48 2020 -0400
@@ -16,13 +16,16 @@
         <param name="all_fasta_source" type="select" label="FASTA reference">
             <options from_data_table="all_fasta"/>
         </param>
-        <param name="url" type="text" value="" label="URL to download the DNAprints file associated with the selected FASTA reference" optional="False" />
+        <param name="url" type="text" value="" label="URL to download the DNAprints file associated with the selected FASTA reference" optional="False"/>
     </inputs>
     <outputs>
-        <data name="out_file" format="data_manager_json" />
+        <data name="out_file" format="data_manager_json"/>
     </outputs>
     <tests>
         <test>
+            <param name="all_fasta_source" value="AF2122"/>
+            <param name="url" value="https://raw.githubusercontent.com/USDA-VS/vSNP_reference_options/master/Mycobacterium_AF2122/NC_002945v4.yml"/>
+            <output name="out_file" value="vsnp_dnaprints.json" compare="contains"/>
         </test>
     </tests>
     <help><![CDATA[