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annotate test-data/amr_cds.bed @ 3:60e606b39897 draft

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author greg
date Tue, 07 Feb 2023 18:16:57 +0000
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636eeb4fb9ac Uploaded
greg
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1 contig_1 484392 485921 62550724|AAX88798.1|AY818309.1|1|1|alo|alo|anthrolysin_O/cereolysin_O_family_cholesterol-dependent_cytolysin_Alo 0.984 +
636eeb4fb9ac Uploaded
greg
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2 contig_1 4673373 4675772 29894390|AAP07680.1|AE016877.1|1|1|inhA2|inhA2|M6_family_metalloprotease_immune_inhibitor_InhA2 1.000 -
636eeb4fb9ac Uploaded
greg
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3 contig_1 4253739 4254749 29894808|AAP08097.1|AE016877.1|1|1|cytK2|cytK2|beta-channel_forming_cytolysin_CytK2 1.000 +
636eeb4fb9ac Uploaded
greg
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4 contig_1 232577 233434 5305719|AAD41788.1|AF132087.1|1|1|plcR|plcR|transcriptional_regulator_PlcR 1.000 +
636eeb4fb9ac Uploaded
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5 contig_1 4667636 4668636 505581118|AGL98063.1|KC527544.1|1|1|cerB|cerB|sphingomyelinase_CerB 0.983 -
636eeb4fb9ac Uploaded
greg
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6 contig_1 4095082 4097472 296323016|ADH05944.1|CP001903.1|1|1|inhA1|inhA1|M6_family_metalloprotease_immune_inhibitor_InhA1 0.998 -
636eeb4fb9ac Uploaded
greg
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7 contig_1 2421494 2422813 29896770|AAP10048.1|AE016877.1|1|1|hblC|hblC|hemolytic_enterotoxin_HBL_lytic_component_L2 0.977 +
636eeb4fb9ac Uploaded
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8 contig_1 3520286 3521566 29895642|AAP08924.1|AE016877.1|1|1|entFM|entFM|enterotoxin_EntFM 0.988 -
636eeb4fb9ac Uploaded
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9 contig_1 2423992 2425119 29896768|AAP10046.1|AE016877.1|1|1|hblB|hblB|hemolytic_enterotoxin_HBL_binding_subunit_HblB 0.996 +
636eeb4fb9ac Uploaded
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10 contig_1 1750170 1751159 29897410|AAP10686.1|AE016877.1|1|1|plcA|plcA|phosphatidylinositol_diacylglycerol-lyase 1.000 +
636eeb4fb9ac Uploaded
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11 contig_1 3448511 3448927 446866507|WP_000943763.1|NG_050591.1|1|1|fosBx1|fosB_gen|fosfomycin_resistance_bacillithiol_transferase_FosBx1 0.998 -
636eeb4fb9ac Uploaded
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12 contig_1 1994015 1995253 29897180|AAP10457.1|AE016877.1|1|1|hlyII|hlyII|hemolysin_II_HlyII 1.000 +
636eeb4fb9ac Uploaded
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13 contig_1 2968066 2968986 1028083092|WP_063842248.1|NG_047482.1|1|1|bla1|bla1|class_A_beta-lactamase_Bla1 0.976 -
636eeb4fb9ac Uploaded
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14 contig_1 2079369 2080142 1028078998|WP_063839879.1|NG_056058.1|1|1|BcII|BcII|BcII_family_subclass_B1_metallo-beta-lactamase 0.963 +
636eeb4fb9ac Uploaded
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15 contig_1 3591341 3592420 29895498|AAP08785.1|AE016877.1|1|1|nheC|nheC|non-hemolytic_enterotoxin_NHE_subunit_C 0.999 -
636eeb4fb9ac Uploaded
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16 contig_1 2425495 2426895 6686906|CAB64770.1|AJ007794.1|1|1|hblA|hblA|hemolytic_enterotoxin_HBL_binding_subunit_HblA 0.988 +