Mercurial > repos > greg > ensure_synced

diff ensure_synced.xml @ 1:281f38df3c58 draft

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Uploaded
author greg
date Thu, 15 Aug 2019 14:55:20 -0400
parents 9180906544b6
children a7be280fa304
line wrap: on
line diff
--- a/ensure_synced.xml	Thu Aug 15 10:37:49 2019 -0400
+++ b/ensure_synced.xml	Thu Aug 15 14:55:20 2019 -0400
@@ -3,7 +3,7 @@
     <command detect_errors="exit_code"><![CDATA[
 #set affy_ids_from_file = 'affy_ids_from_file.txt'
 grep "#CHROM" $input > test.head &&
-tr '\t' '\n' < test.head > $affy_ids_from_file
+tr '\t' '\n' < test.head > $affy_ids_from_file &&
 python '$__tool_directory__/ensure_synced.py'
 --database_connection_string '$__app__.config.corals_database_connection'
 --affy_ids_from_file '$affy_ids_from_file'