Mercurial > repos > greg > insect_phenology_model

comparison insect_phenology_model.xml @ 60:393085589438 draft

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author greg
date Thu, 20 Dec 2018 09:15:52 -0500
parents 892cf703be62
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59:892cf703be62 60:393085589438
64 <inputs> 64 <inputs>
65 <param name="input_norm" type="data" format="csv" label="30 year normals temperature data"> 65 <param name="input_norm" type="data" format="csv" label="30 year normals temperature data">
66 <validator type="expression" message="30 year normals temperature data must have 10 columns and 366 rows">value is not None and value.metadata.columns==10 and value.metadata.data_lines==366</validator> 66 <validator type="expression" message="30 year normals temperature data must have 10 columns and 366 rows">value is not None and value.metadata.columns==10 and value.metadata.data_lines==366</validator>
67 </param> 67 </param>
68 <conditional name="merge_ytd_temperature_data_cond"> 68 <conditional name="merge_ytd_temperature_data_cond">
69 <param name="merge_ytd_temperature_data" type="select" label="Merge year-to-date temperature data with 30 year normals temperature data?"> 69 <param name="merge_ytd_temperature_data" type="select" label="Merge daily actuals temperature data with 30 year normals temperature data?">
70 <option value="yes" selected="true">Yes</option> 70 <option value="yes" selected="true">Yes</option>
71 <option value="no">No</option> 71 <option value="no">No</option>
72 </param> 72 </param>
73 <when value="yes"> 73 <when value="yes">
74 <param name="input_ytd" type="data" format="csv" label="Year-to-date temperature data"> 74 <param name="input_ytd" type="data" format="csv" label="Daily actuals temperature data">
75 <validator type="expression" message="Year-to-date temperature data must have 6 columns">value is not None and value.metadata.columns==6</validator> 75 <validator type="expression" message="Daily actuals temperature data must have 6 columns">value is not None and value.metadata.columns==6</validator>
76 </param> 76 </param>
77 <param name="location" type="text" value="" optional="true" label="Location" help="Enter the location or leave blank to use the station name from 30 year normals data."/> 77 <param name="location" type="text" value="" optional="true" label="Location" help="Enter the location or leave blank to use the station name from 30 year normals data."/>
78 </when> 78 </when>
79 <when value="no"/> 79 <when value="no"/>
80 </conditional> 80 </conditional>
81 <param name="insect" type="select" label="Select insect"> 81 <param name="insect" type="select" label="Select insect">
82 <option value="BMSB" selected="True">Brown Marmorated Stink Bug</option> 82 <option value="BMSB" selected="True">Brown Marmorated Stink Bug</option>
83 </param> 83 </param>
84 <param name="replications" type="integer" value="10" min="2" label="Number of replications"/> 84 <param name="replications" type="integer" value="5" min="2" label="Number of replications"/>
85 <param name="insects_per_replication" type="integer" value="1000" min="100" label="Number of insects with which to start each replication"/> 85 <param name="insects_per_replication" type="integer" value="1000" min="100" label="Number of insects with which to start each replication"/>
86 <param name="photoperiod" type="float" value="13.5" min="0" label="Critical photoperiod for diapause induction/termination"/> 86 <param name="photoperiod" type="float" value="13.5" min="0" label="Critical photoperiod for diapause induction/termination"/>
87 <param name="egg_mortality" type="float" value="1" min="0" max="1" label="Adjustment rate for egg mortality" help="Floating point value between 0 and 1"/> 87 <param name="egg_mortality" type="float" value="1" min="0" max="1" label="Adjustment rate for egg mortality" help="Floating point value between 0 and 1"/>
88 <param name="nymph_mortality" type="float" value="1" min="0" label="Adjustment rate for nymph mortality"/> 88 <param name="nymph_mortality" type="float" value="1" min="0" label="Adjustment rate for nymph mortality"/>
89 <param name="adult_mortality" type="float" value="1" min="0" label="Adjustment rate for adult mortality"/> 89 <param name="adult_mortality" type="float" value="1" min="0" label="Adjustment rate for adult mortality"/>
240 **Required options** 240 **Required options**
241 241
242 * **30 year normals temperature data** - the dataset from your history containing the 30-year normals temperature data (available at http://pestwatch.psu.edu/ghcn). 242 * **30 year normals temperature data** - the dataset from your history containing the 30-year normals temperature data (available at http://pestwatch.psu.edu/ghcn).
243 * **Merge year-to-date temperature data with 30 year normals temperature data** - select Yes to merge a year-to-date temperature dataset from your history into the selected 30 year normals temperature data. 243 * **Merge year-to-date temperature data with 30 year normals temperature data** - select Yes to merge a year-to-date temperature dataset from your history into the selected 30 year normals temperature data.
244 244
245 * **Year-to-date temperature data** - the dataset from your history containing the year-to-date temperature data (available at http://pestwatch.psu.edu/minmax). 245 * **Daily actuals temperature data** - the dataset from your history containing the daily actuals temperature data (available at http://pestwatch.psu.edu/minmax).
246 246
247 * **Location** - the location associated with the selected temperature data. 247 * **Location** - the location associated with the selected temperature data.
248 * **Select insect** - currently only the Brown Marmorated Stink Bug can be analyzed. 248 * **Select insect** - currently only the Brown Marmorated Stink Bug can be analyzed.
249 * **Number of replications** - number of replications. 249 * **Number of replications** - number of replications.
250 * **Number of insects with which to start each replication** - the analysis for each replication will start with this number of insects. 250 * **Number of insects with which to start each replication** - the analysis for each replication will start with this number of insects.