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comparison insect_phenology_model.xml @ 54:5bb1d76c29ca draft

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author greg
date Fri, 02 Nov 2018 11:16:46 -0400
parents 927321ed0322
children 8c2b9eb9f9af
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53:b7c9837047d9 54:5bb1d76c29ca
1 <tool id="insect_phenology_model" name="Insect phenology model" version="1.1.0"> 1 <tool id="insect_phenology_model" name="Insect phenology model" version="1.2.0">
2 <description>expressing stage-specific phenology and population dynamics</description> 2 <description>expressing stage-specific phenology and population dynamics</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="1.4.4">r-optparse</requirement> 4 <requirement type="package" version="1.4.4">r-optparse</requirement>
5 </requirements> 5 </requirements>
6 <command detect_errors="exit_code"><![CDATA[ 6 <command detect_errors="exit_code"><![CDATA[
82 <option value="BMSB" selected="True">Brown Marmorated Stink Bug</option> 82 <option value="BMSB" selected="True">Brown Marmorated Stink Bug</option>
83 </param> 83 </param>
84 <param name="replications" type="integer" value="10" min="2" label="Number of replications"/> 84 <param name="replications" type="integer" value="10" min="2" label="Number of replications"/>
85 <param name="insects_per_replication" type="integer" value="1000" min="1" label="Number of insects with which to start each replication"/> 85 <param name="insects_per_replication" type="integer" value="1000" min="1" label="Number of insects with which to start each replication"/>
86 <param name="photoperiod" type="float" value="13.5" min="0" label="Critical photoperiod for diapause induction/termination"/> 86 <param name="photoperiod" type="float" value="13.5" min="0" label="Critical photoperiod for diapause induction/termination"/>
87 <param name="egg_mortality" type="integer" value="1" min="0" label="Adjustment rate for egg mortality"/> 87 <param name="egg_mortality" type="float" value="1" min="0" max="1" label="Adjustment rate for egg mortality"/>
88 <param name="nymph_mortality" type="integer" value="1" min="0" label="Adjustment rate for nymph mortality"/> 88 <param name="nymph_mortality" type="float" value="1" min="0" label="Adjustment rate for nymph mortality"/>
89 <param name="adult_mortality" type="integer" value="1" min="0" label="Adjustment rate for adult mortality"/> 89 <param name="adult_mortality" type="float" value="1" min="0" label="Adjustment rate for adult mortality"/>
90 <param name="oviposition" type="integer" value="1" min="0" label="Adjustment oviposition rate"/> 90 <param name="oviposition" type="float" value="1" min="0" label="Adjustment oviposition rate"/>
91 <param name="min_clutch_size" type="integer" value="0" min="0" label="Adjustment of minimum clutch size"/> 91 <param name="min_clutch_size" type="float" value="0" min="0" label="Adjustment of minimum clutch size"/>
92 <param name="max_clutch_size" type="integer" value="0" min="0" label="Adjustment of maximum clutch size"/> 92 <param name="max_clutch_size" type="float" value="0" min="0" label="Adjustment of maximum clutch size"/>
93 <param name="young_nymph_accumulation" type="integer" value="0" min="0" label="Adjustment of degree-days accumulation (egg->young nymph)"/> 93 <param name="young_nymph_accumulation" type="float" value="0" min="0" label="Adjustment of degree-days accumulation (egg->young nymph)"/>
94 <param name="old_nymph_accumulation" type="integer" value="0" min="0" label="Adjustment of degree-days accumulation (young nymph->old nymph)"/> 94 <param name="old_nymph_accumulation" type="float" value="0" min="0" label="Adjustment of degree-days accumulation (young nymph->old nymph)"/>
95 <param name="adult_accumulation" type="integer" value="0" min="0" label="Adjustment of degree-days accumulation (old nymph->adult)"/> 95 <param name="adult_accumulation" type="float" value="0" min="0" label="Adjustment of degree-days accumulation (old nymph->adult)"/>
96 <param name="plot_generations_separately" type="select" label="Plot generations separately?"> 96 <param name="plot_generations_separately" type="select" label="Plot generations separately?">
97 <option value="yes" selected="True">Yes</option> 97 <option value="yes" selected="True">Yes</option>
98 <option value="no">No</option> 98 <option value="no">No</option>
99 </param> 99 </param>
100 <param name="plot_egg_life_stage" type="select" label="Plot egg life stage?"> 100 <param name="plot_egg_life_stage" type="select" label="Plot egg life stage?">