Mercurial > repos > greg > insect_phenology_model

comparison insect_phenology_model.xml @ 28:afe6d8bac0c0 draft

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author greg
date Mon, 12 Mar 2018 09:15:16 -0400
parents 93209c167a61
children dd0f1b7528aa
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27:452e0e189e84 28:afe6d8bac0c0
121 <param name="replications" value="2" /> 121 <param name="replications" value="2" />
122 <param name="plot_generations_separately" value="no" /> 122 <param name="plot_generations_separately" value="no" />
123 <param name="plot_egg_life_stage" value="no" /> 123 <param name="plot_egg_life_stage" value="no" />
124 <param name="life_stages_nymph" value="Young" /> 124 <param name="life_stages_nymph" value="Young" />
125 <param name="life_stages_adult" value="Pre-vittelogenic" /> 125 <param name="life_stages_adult" value="Pre-vittelogenic" />
126 <output name="output" file="output1.csv" ftype="csv"/> 126 <output name="output" file="output1.csv" ftype="csv" compare="contains"/>
127 <output_collection name="output_collection" type="list"> 127 <output_collection name="output_collection" type="list">
128 <element name="02_young_nymph_pop.pdf" file="pop_by_generation.pdf" ftype="pdf" compare="contains"/> 128 <element name="02_young_nymph_pop.pdf" file="plot.pdf" ftype="pdf" compare="contains"/>
129 <element name="05_pre-vittelogenic_adult_pop.pdf" file="pop_by_generation.pdf" ftype="pdf" compare="contains"/> 129 <element name="05_pre-vittelogenic_adult_pop.pdf" file="plot.pdf" ftype="pdf" compare="contains"/>
130 </output_collection> 130 </output_collection>
131 </test> 131 </test>
132 <!--
133 <test> 132 <test>
134 <param name="input" value="state_college.csv" ftype="csv" /> 133 <param name="input" value="state_college.csv" ftype="csv" />
135 <param name="location" value="State College PA" /> 134 <param name="location" value="State College PA" />
136 <param name="replications" value="2" /> 135 <param name="replications" value="2" />
137 <param name="plot_generations_separately" value="no" /> 136 <param name="plot_generations_separately" value="no" />
138 <output_collection name="output_collection" type="list"> 137 <output name="output" file="output2.csv" ftype="csv" compare="contains"/>
139 <element name="01_egg_pop.pdf" file="pop_by_generation.pdf" ftype="pdf" compare="contains"/> 138 <output_collection name="output_collection" type="list">
140 <element name="04_total_nymph_pop.pdf" file="pop_by_generation.pdf" ftype="pdf" compare="contains"/> 139 <element name="01_egg_pop.pdf" file="plot.pdf" ftype="pdf" compare="contains"/>
141 <element name="08_total_adult_pop.pdf" file="pop_by_generation.pdf" ftype="pdf" compare="contains"/> 140 <element name="04_total_nymph_pop.pdf" file="plot.pdf" ftype="pdf" compare="contains"/>
142 <element name="09_total_pop.pdf" file="pop_by_generation.pdf" ftype="pdf" compare="contains"/> 141 <element name="08_total_adult_pop.pdf" file="plot.pdf" ftype="pdf" compare="contains"/>
142 <element name="09_total_pop.pdf" file="plot.pdf" ftype="pdf" compare="contains"/>
143 </output_collection> 143 </output_collection>
144 </test> 144 </test>
145 <test> 145 <test>
146 <param name="input" value="state_college.csv" ftype="csv" /> 146 <param name="input" value="state_college.csv" ftype="csv" />
147 <param name="location" value="State College PA" /> 147 <param name="location" value="State College PA" />
148 <param name="replications" value="2" /> 148 <param name="replications" value="2" />
149 <param name="plot_egg_life_stage" value="no" /> 149 <param name="plot_egg_life_stage" value="no" />
150 <param name="life_stages_nymph" value="Old" /> 150 <param name="life_stages_nymph" value="Old" />
151 <param name="plot_adult_life_stage" value="no" /> 151 <param name="plot_adult_life_stage" value="no" />
152 <output_collection name="output_collection" type="list"> 152 <output name="output" file="output3.csv" ftype="csv" compare="contains"/>
153 <element name="03_old_nymph_pop_by_generation.pdf" file="pop_by_generation.pdf" ftype="pdf" compare="contains"/> 153 <output_collection name="output_collection" type="list">
154 </output_collection> 154 <element name="03_old_nymph_pop_by_generation.pdf" file="plot.pdf" ftype="pdf" compare="contains"/>
155 </test> 155 </output_collection>
156 <test> 156 </test>
157 <param name="input" value="state_college.csv" ftype="csv" /> 157 <test>
158 <param name="location" value="State College PA" /> 158 <param name="input" value="state_college.csv" ftype="csv" />
159 <param name="replications" value="2" /> 159 <param name="location" value="State College PA" />
160 <output_collection name="output_collection" type="list"> 160 <param name="replications" value="2" />
161 <element name="01_egg_pop_by_generation.pdf" file="pop_by_generation.pdf" ftype="pdf" compare="contains"/> 161 <output name="output" file="output4.csv" ftype="csv" compare="contains"/>
162 <element name="04_total_nymph_pop_by_generation.pdf" file="pop_by_generation.pdf" ftype="pdf" compare="contains"/> 162 <output_collection name="output_collection" type="list">
163 <element name="08_total_adult_pop_by_generation.pdf" file="pop_by_generation.pdf" ftype="pdf" compare="contains"/> 163 <element name="01_egg_pop_by_generation.pdf" file="plot.pdf" ftype="pdf" compare="contains"/>
164 <element name="09_total_pop_by_generation.pdf" file="pop_by_generation.pdf" ftype="pdf" compare="contains"/> 164 <element name="04_total_nymph_pop_by_generation.pdf" file="plot.pdf" ftype="pdf" compare="contains"/>
165 </output_collection> 165 <element name="08_total_adult_pop_by_generation.pdf" file="plot.pdf" ftype="pdf" compare="contains"/>
166 </test> 166 <element name="09_total_pop_by_generation.pdf" file="plot.pdf" ftype="pdf" compare="contains"/>
167 --> 167 </output_collection>
168 </test>
168 </tests> 169 </tests>
169 <help> 170 <help>
170 **What it does** 171 **What it does**
171 172
172 Provides an agent-based stochastic model expressing stage-specific phenology and population dynamics for an insect species across geographic regions. 173 Provides an agent-based stochastic model expressing stage-specific phenology and population dynamics for an insect species across geographic regions.