Mercurial > repos > greg > insect_phenology_model
diff insect_phenology_model.xml @ 50:927321ed0322 draft
Uploaded
author | greg |
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date | Tue, 07 Aug 2018 12:59:06 -0400 |
parents | 99e1c1300fcd |
children | 5bb1d76c29ca |
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--- a/insect_phenology_model.xml Tue Jun 05 07:52:59 2018 -0400 +++ b/insect_phenology_model.xml Tue Aug 07 12:59:06 2018 -0400 @@ -8,7 +8,6 @@ #set output_data_dir = "output_data_dir" #set output_plots_dir = "output_plots_dir" #set error_file = $os.path.join($output_data_dir, "04_combined_generations.csv") -#set custom_date_interval = $custom_date_interval_cond.custom_date_interval #set life_stages = list() #set plot_adult_life_stage = $plot_adult_life_stage_cond.plot_adult_life_stage #set plot_nymph_life_stage = $plot_nymph_life_stage_cond.plot_nymph_life_stage @@ -55,10 +54,7 @@ --plot_generations_separately $plot_generations_separately --plot_std_error $plot_std_error --replications $replications -#if str($custom_date_interval) == "yes": - --start_date '$custom_date_interval_cond.start_date' - --end_date '$custom_date_interval_cond.end_date' -#end if +--script_dir '$__tool_directory__' --young_nymph_accumulation $young_nymph_accumulation &>ipm_log.txt; if [[ $? -ne 0 ]]; then @@ -97,21 +93,6 @@ <param name="young_nymph_accumulation" type="integer" value="0" min="0" label="Adjustment of degree-days accumulation (egg->young nymph)"/> <param name="old_nymph_accumulation" type="integer" value="0" min="0" label="Adjustment of degree-days accumulation (young nymph->old nymph)"/> <param name="adult_accumulation" type="integer" value="0" min="0" label="Adjustment of degree-days accumulation (old nymph->adult)"/> - <conditional name="custom_date_interval_cond"> - <param name="custom_date_interval" type="select" label="Set date interval for plots?" help="Scales the x axis in plots from weeks to days"> - <option value="no" selected="true">No</option> - <option value="yes">Yes</option> - </param> - <when value="no"/> - <when value="yes"> - <param name="start_date" type="text" value="" label="Start date" help="Format must be yyyy-mm-dd"> - <validator type="expression" message="Date must have the format yyyy-mm-dd">len(value.split('-')[0])==4 and int(value.split('-')[0]) and len(value.split('-')[1])==2 and int(value.split('-')[1]) and len(value.split('-')[2])==2 and int(value.split('-')[2])</validator> - </param> - <param name="end_date" type="text" value="" label="End date" help="Format must be yyyy-mm-dd"> - <validator type="expression" message="Date must have the format yyyy-mm-dd">len(value.split('-')[0])==4 and int(value.split('-')[0]) and len(value.split('-')[1])==2 and int(value.split('-')[1]) and len(value.split('-')[2])==2 and int(value.split('-')[2])</validator> - </param> - </when> - </conditional> <param name="plot_generations_separately" type="select" label="Plot generations separately?"> <option value="yes" selected="True">Yes</option> <option value="no">No</option>